Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC13.69□□□□□ -0.22
SGCEO43556 AL844908.2-201ENST00000609461 460 ntBASIC13.69□□□□□ -0.22
SGCEO43556 AC106028.4-201ENST00000614509 607 ntBASIC13.69□□□□□ -0.22
SGCEO43556 AL390754.1-201ENST00000619088 582 ntBASIC13.69□□□□□ -0.22
SGCEO43556 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC13.69□□□□□ -0.22
SGCEO43556 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SGCEO43556 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SGCEO43556 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SGCEO43556 DEK-201ENST00000244776 1441 ntTSL 2 BASIC13.69□□□□□ -0.22
SGCEO43556 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
SGCEO43556 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SGCEO43556 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SGCEO43556 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
SGCEO43556 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
SGCEO43556 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
SGCEO43556 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SGCEO43556 AC006486.2-201ENST00000624246 2199 ntBASIC13.69□□□□□ -0.22
SGCEO43556 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC13.69□□□□□ -0.22
SGCEO43556 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC13.69□□□□□ -0.22
SGCEO43556 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
SGCEO43556 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SGCEO43556 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SGCEO43556 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC13.69□□□□□ -0.22
SGCEO43556 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SGCEO43556 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC13.69□□□□□ -0.22
SGCEO43556 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SGCEO43556 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC13.69□□□□□ -0.22
SGCEO43556 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SGCEO43556 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC13.69□□□□□ -0.22
SGCEO43556 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SGCEO43556 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC13.68□□□□□ -0.22
SGCEO43556 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SGCEO43556 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC13.68□□□□□ -0.22
SGCEO43556 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SGCEO43556 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
SGCEO43556 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SGCEO43556 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SGCEO43556 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
SGCEO43556 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SGCEO43556 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC13.68□□□□□ -0.22
SGCEO43556 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SGCEO43556 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SGCEO43556 AC084364.1-201ENST00000551967 1556 ntBASIC13.68□□□□□ -0.22
SGCEO43556 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC13.68□□□□□ -0.22
SGCEO43556 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SGCEO43556 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC13.68□□□□□ -0.22
SGCEO43556 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC13.68□□□□□ -0.22
SGCEO43556 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SGCEO43556 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC13.68□□□□□ -0.22
SGCEO43556 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SGCEO43556 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC13.68□□□□□ -0.22
SGCEO43556 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC13.68□□□□□ -0.22
SGCEO43556 KRT18P64-201ENST00000434946 1219 ntBASIC13.68□□□□□ -0.22
SGCEO43556 RPL13P2-201ENST00000440687 659 ntBASIC13.68□□□□□ -0.22
SGCEO43556 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC13.68□□□□□ -0.22
SGCEO43556 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SGCEO43556 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
SGCEO43556 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC13.68□□□□□ -0.22
SGCEO43556 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SGCEO43556 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SGCEO43556 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC13.68□□□□□ -0.22
SGCEO43556 ZNF890P-202ENST00000530367 1156 ntBASIC13.68□□□□□ -0.22
SGCEO43556 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SGCEO43556 AC044860.1-202ENST00000559481 777 ntBASIC13.68□□□□□ -0.22
SGCEO43556 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SGCEO43556 LINC01115-203ENST00000606068 577 ntBASIC13.68□□□□□ -0.22
SGCEO43556 AC093512.1-201ENST00000617969 520 ntBASIC13.68□□□□□ -0.22
SGCEO43556 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
SGCEO43556 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SGCEO43556 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
SGCEO43556 AF228730.6-201ENST00000641497 218 ntBASIC13.68□□□□□ -0.22
SGCEO43556 AC084121.3-201ENST00000641716 218 ntBASIC13.68□□□□□ -0.22
SGCEO43556 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SGCEO43556 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
SGCEO43556 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC13.68□□□□□ -0.22
SGCEO43556 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SGCEO43556 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SGCEO43556 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC13.68□□□□□ -0.22
SGCEO43556 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SGCEO43556 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC13.68□□□□□ -0.22
SGCEO43556 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC13.68□□□□□ -0.22
SGCEO43556 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SGCEO43556 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SGCEO43556 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SGCEO43556 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SGCEO43556 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
SGCEO43556 ST20-AS1-201ENST00000560255 4223 ntBASIC13.68□□□□□ -0.22
SGCEO43556 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
SGCEO43556 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC13.68□□□□□ -0.22
SGCEO43556 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
SGCEO43556 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
SGCEO43556 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SGCEO43556 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
SGCEO43556 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
SGCEO43556 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SGCEO43556 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SGCEO43556 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
SGCEO43556 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC13.67□□□□□ -0.22
SGCEO43556 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SGCEO43556 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms