Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
PHGDHO43175 AC051619.7-201ENST00000568314 623 ntBASIC15.34■□□□□ 0.05
PHGDHO43175 AC011467.4-201ENST00000594891 528 ntBASIC15.34■□□□□ 0.05
PHGDHO43175 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC15.34■□□□□ 0.05
PHGDHO43175 AL109936.8-201ENST00000641772 604 ntBASIC15.34■□□□□ 0.05
PHGDHO43175 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PHGDHO43175 REXO1L4P-201ENST00000605109 1937 ntBASIC15.34■□□□□ 0.05
PHGDHO43175 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC15.34■□□□□ 0.05
PHGDHO43175 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PHGDHO43175 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
PHGDHO43175 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC15.34■□□□□ 0.05
PHGDHO43175 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
PHGDHO43175 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
PHGDHO43175 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC15.34■□□□□ 0.05
PHGDHO43175 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
PHGDHO43175 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC15.34■□□□□ 0.05
PHGDHO43175 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PHGDHO43175 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PHGDHO43175 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PHGDHO43175 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
PHGDHO43175 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
PHGDHO43175 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.05
PHGDHO43175 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC15.33■□□□□ 0.05
PHGDHO43175 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC15.33■□□□□ 0.05
PHGDHO43175 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC15.33■□□□□ 0.05
PHGDHO43175 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
PHGDHO43175 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
PHGDHO43175 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC15.33■□□□□ 0.04
PHGDHO43175 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PHGDHO43175 RDX-218ENST00000544551 4117 ntTSL 2 BASIC15.33■□□□□ 0.04
PHGDHO43175 OR2I1P-209ENST00000641730 5365 ntBASIC15.33■□□□□ 0.04
PHGDHO43175 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PHGDHO43175 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC15.33■□□□□ 0.04
PHGDHO43175 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
PHGDHO43175 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
PHGDHO43175 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PHGDHO43175 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PHGDHO43175 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC15.33■□□□□ 0.04
PHGDHO43175 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
PHGDHO43175 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC15.33■□□□□ 0.04
PHGDHO43175 SLBP-205ENST00000488267 987 ntTSL 2 BASIC15.33■□□□□ 0.04
PHGDHO43175 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC15.33■□□□□ 0.04
PHGDHO43175 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC15.33■□□□□ 0.04
PHGDHO43175 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC15.33■□□□□ 0.04
PHGDHO43175 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC15.33■□□□□ 0.04
PHGDHO43175 TBCB-211ENST00000589996 724 ntTSL 3 BASIC15.33■□□□□ 0.04
PHGDHO43175 AC074044.1-201ENST00000609673 707 ntBASIC15.33■□□□□ 0.04
PHGDHO43175 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC15.33■□□□□ 0.04
PHGDHO43175 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PHGDHO43175 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC15.33■□□□□ 0.04
PHGDHO43175 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PHGDHO43175 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
PHGDHO43175 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PHGDHO43175 AC140479.7-201ENST00000636301 2332 ntBASIC15.33■□□□□ 0.04
PHGDHO43175 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
PHGDHO43175 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
PHGDHO43175 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
PHGDHO43175 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
PHGDHO43175 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC15.33■□□□□ 0.04
PHGDHO43175 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC15.33■□□□□ 0.04
PHGDHO43175 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PHGDHO43175 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC15.33■□□□□ 0.04
PHGDHO43175 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
PHGDHO43175 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
PHGDHO43175 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PHGDHO43175 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PHGDHO43175 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PHGDHO43175 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PHGDHO43175 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC15.32■□□□□ 0.04
PHGDHO43175 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC15.32■□□□□ 0.04
PHGDHO43175 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC15.32■□□□□ 0.04
PHGDHO43175 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
PHGDHO43175 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
PHGDHO43175 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PHGDHO43175 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PHGDHO43175 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.32■□□□□ 0.04
PHGDHO43175 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC15.32■□□□□ 0.04
PHGDHO43175 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PHGDHO43175 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PHGDHO43175 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PHGDHO43175 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC15.32■□□□□ 0.04
PHGDHO43175 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
PHGDHO43175 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
PHGDHO43175 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PHGDHO43175 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC15.32■□□□□ 0.04
PHGDHO43175 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC15.32■□□□□ 0.04
PHGDHO43175 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PHGDHO43175 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC15.32■□□□□ 0.04
PHGDHO43175 AC125807.1-201ENST00000483097 614 ntBASIC15.32■□□□□ 0.04
PHGDHO43175 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
PHGDHO43175 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC15.32■□□□□ 0.04
PHGDHO43175 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
PHGDHO43175 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC15.32■□□□□ 0.04
PHGDHO43175 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC15.32■□□□□ 0.04
PHGDHO43175 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC15.32■□□□□ 0.04
PHGDHO43175 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC15.32■□□□□ 0.04
PHGDHO43175 AC073592.8-201ENST00000624126 511 ntBASIC15.32■□□□□ 0.04
PHGDHO43175 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PHGDHO43175 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PHGDHO43175 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms