Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
TRAV5A0A0B4J249 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
TRAV5A0A0B4J249 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
TRAV5A0A0B4J249 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC12.01□□□□□ -0.49
TRAV5A0A0B4J249 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC12.01□□□□□ -0.49
TRAV5A0A0B4J249 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TRAV5A0A0B4J249 UXT-AS1-201ENST00000590504 1525 ntBASIC12.01□□□□□ -0.49
TRAV5A0A0B4J249 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TRAV5A0A0B4J249 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
TRAV5A0A0B4J249 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC12.01□□□□□ -0.49
TRAV5A0A0B4J249 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC12.01□□□□□ -0.49
TRAV5A0A0B4J249 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TRAV5A0A0B4J249 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC12.01□□□□□ -0.49
TRAV5A0A0B4J249 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC12□□□□□ -0.49
TRAV5A0A0B4J249 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC12□□□□□ -0.49
TRAV5A0A0B4J249 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC12□□□□□ -0.49
TRAV5A0A0B4J249 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
TRAV5A0A0B4J249 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
TRAV5A0A0B4J249 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC12□□□□□ -0.49
TRAV5A0A0B4J249 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TRAV5A0A0B4J249 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC12□□□□□ -0.49
TRAV5A0A0B4J249 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
TRAV5A0A0B4J249 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC12□□□□□ -0.49
TRAV5A0A0B4J249 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TRAV5A0A0B4J249 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TRAV5A0A0B4J249 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC12□□□□□ -0.49
TRAV5A0A0B4J249 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
TRAV5A0A0B4J249 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC12□□□□□ -0.49
TRAV5A0A0B4J249 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
TRAV5A0A0B4J249 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TRAV5A0A0B4J249 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TRAV5A0A0B4J249 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
TRAV5A0A0B4J249 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TRAV5A0A0B4J249 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC12□□□□□ -0.49
TRAV5A0A0B4J249 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
TRAV5A0A0B4J249 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TRAV5A0A0B4J249 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
TRAV5A0A0B4J249 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC12□□□□□ -0.49
TRAV5A0A0B4J249 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC12□□□□□ -0.49
TRAV5A0A0B4J249 PTMS-202ENST00000389462 773 ntTSL 2 BASIC12□□□□□ -0.49
TRAV5A0A0B4J249 FES-203ENST00000394302 2133 ntTSL 5 BASIC12□□□□□ -0.49
TRAV5A0A0B4J249 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
TRAV5A0A0B4J249 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC12□□□□□ -0.49
TRAV5A0A0B4J249 RN7SL589P-201ENST00000481268 310 ntBASIC12□□□□□ -0.49
TRAV5A0A0B4J249 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC12□□□□□ -0.49
TRAV5A0A0B4J249 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC12□□□□□ -0.49
TRAV5A0A0B4J249 RNA5SP416-201ENST00000516838 111 ntBASIC12□□□□□ -0.49
TRAV5A0A0B4J249 SLC25A39P2-201ENST00000537614 270 ntBASIC12□□□□□ -0.49
TRAV5A0A0B4J249 SUOX-214ENST00000551841 906 ntTSL 3 BASIC12□□□□□ -0.49
TRAV5A0A0B4J249 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC12□□□□□ -0.49
TRAV5A0A0B4J249 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC12□□□□□ -0.49
TRAV5A0A0B4J249 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC12□□□□□ -0.49
TRAV5A0A0B4J249 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
TRAV5A0A0B4J249 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
TRAV5A0A0B4J249 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TRAV5A0A0B4J249 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC12□□□□□ -0.49
TRAV5A0A0B4J249 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
TRAV5A0A0B4J249 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC12□□□□□ -0.49
TRAV5A0A0B4J249 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC12□□□□□ -0.49
TRAV5A0A0B4J249 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TRAV5A0A0B4J249 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
TRAV5A0A0B4J249 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC12□□□□□ -0.49
TRAV5A0A0B4J249 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
TRAV5A0A0B4J249 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC12□□□□□ -0.49
TRAV5A0A0B4J249 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC12□□□□□ -0.49
TRAV5A0A0B4J249 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC12□□□□□ -0.49
TRAV5A0A0B4J249 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC12□□□□□ -0.49
TRAV5A0A0B4J249 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TRAV5A0A0B4J249 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TRAV5A0A0B4J249 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TRAV5A0A0B4J249 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TRAV5A0A0B4J249 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC12□□□□□ -0.49
TRAV5A0A0B4J249 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TRAV5A0A0B4J249 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC12□□□□□ -0.49
TRAV5A0A0B4J249 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC12□□□□□ -0.49
TRAV5A0A0B4J249 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TRAV5A0A0B4J249 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC12□□□□□ -0.49
TRAV5A0A0B4J249 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
TRAV5A0A0B4J249 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRAV5A0A0B4J249 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
TRAV5A0A0B4J249 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRAV5A0A0B4J249 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRAV5A0A0B4J249 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRAV5A0A0B4J249 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC11.99□□□□□ -0.49
TRAV5A0A0B4J249 DKFZP434A062-201ENST00000573103 5021 ntBASIC11.99□□□□□ -0.49
TRAV5A0A0B4J249 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC11.99□□□□□ -0.49
TRAV5A0A0B4J249 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
TRAV5A0A0B4J249 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRAV5A0A0B4J249 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC11.99□□□□□ -0.49
TRAV5A0A0B4J249 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC11.99□□□□□ -0.49
TRAV5A0A0B4J249 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
TRAV5A0A0B4J249 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
TRAV5A0A0B4J249 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
TRAV5A0A0B4J249 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRAV5A0A0B4J249 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRAV5A0A0B4J249 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRAV5A0A0B4J249 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC11.99□□□□□ -0.49
TRAV5A0A0B4J249 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRAV5A0A0B4J249 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRAV5A0A0B4J249 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms