Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 UBL5-208ENST00000593087 320 ntTSL 3 BASIC14.98□□□□□ -0.01
PCDHGA11Q9Y5H2 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PCDHGA11Q9Y5H2 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
PCDHGA11Q9Y5H2 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.98□□□□□ -0.01
PCDHGA11Q9Y5H2 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCDHGA11Q9Y5H2 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCDHGA11Q9Y5H2 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
PCDHGA11Q9Y5H2 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PCDHGA11Q9Y5H2 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCDHGA11Q9Y5H2 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PCDHGA11Q9Y5H2 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCDHGA11Q9Y5H2 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCDHGA11Q9Y5H2 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCDHGA11Q9Y5H2 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCDHGA11Q9Y5H2 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCDHGA11Q9Y5H2 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCDHGA11Q9Y5H2 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCDHGA11Q9Y5H2 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PCDHGA11Q9Y5H2 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PCDHGA11Q9Y5H2 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.98□□□□□ -0.01
PCDHGA11Q9Y5H2 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC14.97□□□□□ -0.01
PCDHGA11Q9Y5H2 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCDHGA11Q9Y5H2 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
PCDHGA11Q9Y5H2 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.97□□□□□ -0.01
PCDHGA11Q9Y5H2 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
PCDHGA11Q9Y5H2 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCDHGA11Q9Y5H2 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCDHGA11Q9Y5H2 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCDHGA11Q9Y5H2 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCDHGA11Q9Y5H2 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCDHGA11Q9Y5H2 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCDHGA11Q9Y5H2 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PCDHGA11Q9Y5H2 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PCDHGA11Q9Y5H2 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
PCDHGA11Q9Y5H2 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC14.97□□□□□ -0.01
PCDHGA11Q9Y5H2 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC14.97□□□□□ -0.01
PCDHGA11Q9Y5H2 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
PCDHGA11Q9Y5H2 AC114501.2-201ENST00000439631 535 ntBASIC14.97□□□□□ -0.01
PCDHGA11Q9Y5H2 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC14.97□□□□□ -0.01
PCDHGA11Q9Y5H2 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC14.97□□□□□ -0.01
PCDHGA11Q9Y5H2 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
PCDHGA11Q9Y5H2 DUX4L27-201ENST00000554796 1261 ntBASIC14.97□□□□□ -0.01
PCDHGA11Q9Y5H2 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC14.97□□□□□ -0.01
PCDHGA11Q9Y5H2 TBCB-211ENST00000589996 724 ntTSL 3 BASIC14.97□□□□□ -0.01
PCDHGA11Q9Y5H2 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
PCDHGA11Q9Y5H2 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
PCDHGA11Q9Y5H2 TEX48-202ENST00000612244 662 ntTSL 3 BASIC14.97□□□□□ -0.01
PCDHGA11Q9Y5H2 AL645728.2-202ENST00000641679 227 ntBASIC14.97□□□□□ -0.01
PCDHGA11Q9Y5H2 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
PCDHGA11Q9Y5H2 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PCDHGA11Q9Y5H2 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.97□□□□□ -0.01
PCDHGA11Q9Y5H2 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC14.97□□□□□ -0.01
PCDHGA11Q9Y5H2 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PCDHGA11Q9Y5H2 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.97□□□□□ -0.01
PCDHGA11Q9Y5H2 MROH4P-201ENST00000431302 1578 ntBASIC14.97□□□□□ -0.01
PCDHGA11Q9Y5H2 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCDHGA11Q9Y5H2 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PCDHGA11Q9Y5H2 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.97□□□□□ -0.01
PCDHGA11Q9Y5H2 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCDHGA11Q9Y5H2 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.97□□□□□ -0.01
PCDHGA11Q9Y5H2 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PCDHGA11Q9Y5H2 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCDHGA11Q9Y5H2 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCDHGA11Q9Y5H2 WASH3P-207ENST00000560956 1394 ntBASIC14.97□□□□□ -0.01
PCDHGA11Q9Y5H2 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCDHGA11Q9Y5H2 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.97□□□□□ -0.01
PCDHGA11Q9Y5H2 AL121723.1-201ENST00000445194 1519 ntBASIC14.97□□□□□ -0.01
PCDHGA11Q9Y5H2 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCDHGA11Q9Y5H2 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCDHGA11Q9Y5H2 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.96□□□□□ -0.01
PCDHGA11Q9Y5H2 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
PCDHGA11Q9Y5H2 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
PCDHGA11Q9Y5H2 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PCDHGA11Q9Y5H2 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PCDHGA11Q9Y5H2 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
PCDHGA11Q9Y5H2 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
PCDHGA11Q9Y5H2 MYO15B-237ENST00000642007 4893 ntBASIC14.96□□□□□ -0.01
PCDHGA11Q9Y5H2 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
PCDHGA11Q9Y5H2 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
PCDHGA11Q9Y5H2 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
PCDHGA11Q9Y5H2 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
PCDHGA11Q9Y5H2 AC139749.1-202ENST00000617529 3139 ntBASIC14.96□□□□□ -0.01
PCDHGA11Q9Y5H2 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
PCDHGA11Q9Y5H2 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
PCDHGA11Q9Y5H2 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC14.96□□□□□ -0.01
PCDHGA11Q9Y5H2 PNMT-202ENST00000394246 821 ntTSL 2 BASIC14.96□□□□□ -0.01
PCDHGA11Q9Y5H2 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
PCDHGA11Q9Y5H2 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC14.96□□□□□ -0.01
PCDHGA11Q9Y5H2 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC14.96□□□□□ -0.01
PCDHGA11Q9Y5H2 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC14.96□□□□□ -0.01
PCDHGA11Q9Y5H2 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC14.96□□□□□ -0.01
PCDHGA11Q9Y5H2 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
PCDHGA11Q9Y5H2 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC14.96□□□□□ -0.01
PCDHGA11Q9Y5H2 AC006538.3-201ENST00000612495 578 ntBASIC14.96□□□□□ -0.01
PCDHGA11Q9Y5H2 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
PCDHGA11Q9Y5H2 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.96□□□□□ -0.01
PCDHGA11Q9Y5H2 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
PCDHGA11Q9Y5H2 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC14.96□□□□□ -0.01
PCDHGA11Q9Y5H2 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
PCDHGA11Q9Y5H2 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms