Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC10.51□□□□□ -0.73
LINC00588Q9Y4M8 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00588Q9Y4M8 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC10.51□□□□□ -0.73
LINC00588Q9Y4M8 AC008741.2-201ENST00000612792 3115 ntBASIC10.51□□□□□ -0.73
LINC00588Q9Y4M8 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00588Q9Y4M8 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00588Q9Y4M8 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
LINC00588Q9Y4M8 RPF1-202ENST00000370656 724 ntTSL 2 BASIC10.51□□□□□ -0.73
LINC00588Q9Y4M8 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00588Q9Y4M8 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC10.51□□□□□ -0.73
LINC00588Q9Y4M8 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00588Q9Y4M8 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00588Q9Y4M8 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00588Q9Y4M8 MPV17-206ENST00000402722 827 ntTSL 3 BASIC10.51□□□□□ -0.73
LINC00588Q9Y4M8 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC10.51□□□□□ -0.73
LINC00588Q9Y4M8 CNN2P8-201ENST00000421872 913 ntBASIC10.51□□□□□ -0.73
LINC00588Q9Y4M8 AC026954.1-201ENST00000429771 1293 ntBASIC10.51□□□□□ -0.73
LINC00588Q9Y4M8 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC10.51□□□□□ -0.73
LINC00588Q9Y4M8 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC10.51□□□□□ -0.73
LINC00588Q9Y4M8 AHRR-211ENST00000515206 462 ntTSL 5 BASIC10.51□□□□□ -0.73
LINC00588Q9Y4M8 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC10.51□□□□□ -0.73
LINC00588Q9Y4M8 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC10.51□□□□□ -0.73
LINC00588Q9Y4M8 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
LINC00588Q9Y4M8 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC10.51□□□□□ -0.73
LINC00588Q9Y4M8 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC10.51□□□□□ -0.73
LINC00588Q9Y4M8 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC10.51□□□□□ -0.73
LINC00588Q9Y4M8 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC10.51□□□□□ -0.73
LINC00588Q9Y4M8 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00588Q9Y4M8 AC138951.2-201ENST00000623455 1161 ntBASIC10.51□□□□□ -0.73
LINC00588Q9Y4M8 AC132938.4-201ENST00000623835 848 ntBASIC10.51□□□□□ -0.73
LINC00588Q9Y4M8 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC10.51□□□□□ -0.73
LINC00588Q9Y4M8 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00588Q9Y4M8 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
LINC00588Q9Y4M8 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC10.51□□□□□ -0.73
LINC00588Q9Y4M8 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC10.51□□□□□ -0.73
LINC00588Q9Y4M8 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00588Q9Y4M8 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC10.51□□□□□ -0.73
LINC00588Q9Y4M8 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00588Q9Y4M8 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00588Q9Y4M8 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00588Q9Y4M8 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00588Q9Y4M8 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00588Q9Y4M8 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00588Q9Y4M8 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00588Q9Y4M8 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00588Q9Y4M8 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00588Q9Y4M8 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC10.51□□□□□ -0.73
LINC00588Q9Y4M8 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC10.51□□□□□ -0.73
LINC00588Q9Y4M8 STK33-217ENST00000534493 1895 ntTSL 2 BASIC10.51□□□□□ -0.73
LINC00588Q9Y4M8 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00588Q9Y4M8 AC087481.3-201ENST00000602886 1894 ntBASIC10.51□□□□□ -0.73
LINC00588Q9Y4M8 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00588Q9Y4M8 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
LINC00588Q9Y4M8 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LINC00588Q9Y4M8 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC10.5□□□□□ -0.73
LINC00588Q9Y4M8 KRT8P14-201ENST00000414254 1442 ntBASIC10.5□□□□□ -0.73
LINC00588Q9Y4M8 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
LINC00588Q9Y4M8 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
LINC00588Q9Y4M8 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
LINC00588Q9Y4M8 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LINC00588Q9Y4M8 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LINC00588Q9Y4M8 CICP11-201ENST00000434745 2827 ntBASIC10.5□□□□□ -0.73
LINC00588Q9Y4M8 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LINC00588Q9Y4M8 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC10.5□□□□□ -0.73
LINC00588Q9Y4M8 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
LINC00588Q9Y4M8 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
LINC00588Q9Y4M8 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LINC00588Q9Y4M8 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LINC00588Q9Y4M8 REXO1L6P-201ENST00000603433 1515 ntBASIC10.5□□□□□ -0.73
LINC00588Q9Y4M8 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
LINC00588Q9Y4M8 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
LINC00588Q9Y4M8 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LINC00588Q9Y4M8 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
LINC00588Q9Y4M8 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
LINC00588Q9Y4M8 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LINC00588Q9Y4M8 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC10.5□□□□□ -0.73
LINC00588Q9Y4M8 YBX1P6-201ENST00000442962 1002 ntBASIC10.5□□□□□ -0.73
LINC00588Q9Y4M8 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC10.5□□□□□ -0.73
LINC00588Q9Y4M8 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
LINC00588Q9Y4M8 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC10.5□□□□□ -0.73
LINC00588Q9Y4M8 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC10.5□□□□□ -0.73
LINC00588Q9Y4M8 AC078819.1-201ENST00000547454 765 ntBASIC10.5□□□□□ -0.73
LINC00588Q9Y4M8 AC012085.1-201ENST00000548270 765 ntBASIC10.5□□□□□ -0.73
LINC00588Q9Y4M8 AL583810.1-201ENST00000553344 1045 ntBASIC10.5□□□□□ -0.73
LINC00588Q9Y4M8 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC10.5□□□□□ -0.73
LINC00588Q9Y4M8 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC10.5□□□□□ -0.73
LINC00588Q9Y4M8 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC10.5□□□□□ -0.73
LINC00588Q9Y4M8 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC10.5□□□□□ -0.73
LINC00588Q9Y4M8 MIR6799-201ENST00000620297 69 ntBASIC10.5□□□□□ -0.73
LINC00588Q9Y4M8 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC10.5□□□□□ -0.73
LINC00588Q9Y4M8 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC10.5□□□□□ -0.73
LINC00588Q9Y4M8 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC10.5□□□□□ -0.73
LINC00588Q9Y4M8 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LINC00588Q9Y4M8 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
LINC00588Q9Y4M8 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LINC00588Q9Y4M8 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LINC00588Q9Y4M8 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LINC00588Q9Y4M8 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
LINC00588Q9Y4M8 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LINC00588Q9Y4M8 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms