Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SHANK2Q9UPX8 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
SHANK2Q9UPX8 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SHANK2Q9UPX8 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC22.29■■□□□ 1.16
SHANK2Q9UPX8 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC22.29■■□□□ 1.16
SHANK2Q9UPX8 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC22.29■■□□□ 1.16
SHANK2Q9UPX8 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC22.29■■□□□ 1.16
SHANK2Q9UPX8 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC22.29■■□□□ 1.16
SHANK2Q9UPX8 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC22.29■■□□□ 1.16
SHANK2Q9UPX8 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SHANK2Q9UPX8 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SHANK2Q9UPX8 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SHANK2Q9UPX8 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
SHANK2Q9UPX8 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SHANK2Q9UPX8 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SHANK2Q9UPX8 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
SHANK2Q9UPX8 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SHANK2Q9UPX8 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SHANK2Q9UPX8 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC22.29■■□□□ 1.16
SHANK2Q9UPX8 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
SHANK2Q9UPX8 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC22.29■■□□□ 1.16
SHANK2Q9UPX8 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC22.28■■□□□ 1.16
SHANK2Q9UPX8 HNRNPA1P41-201ENST00000397777 928 ntBASIC22.28■■□□□ 1.16
SHANK2Q9UPX8 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
SHANK2Q9UPX8 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC22.28■■□□□ 1.16
SHANK2Q9UPX8 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC22.28■■□□□ 1.16
SHANK2Q9UPX8 RN7SL818P-201ENST00000485099 259 ntBASIC22.28■■□□□ 1.16
SHANK2Q9UPX8 CENPX-208ENST00000584347 799 ntTSL 2 BASIC22.28■■□□□ 1.16
SHANK2Q9UPX8 RN7SL725P-201ENST00000606439 259 ntBASIC22.28■■□□□ 1.16
SHANK2Q9UPX8 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC22.28■■□□□ 1.16
SHANK2Q9UPX8 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC22.28■■□□□ 1.16
SHANK2Q9UPX8 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SHANK2Q9UPX8 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC22.28■■□□□ 1.16
SHANK2Q9UPX8 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
SHANK2Q9UPX8 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
SHANK2Q9UPX8 KRT8P28-201ENST00000433288 1390 ntBASIC22.28■■□□□ 1.16
SHANK2Q9UPX8 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
SHANK2Q9UPX8 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC22.28■■□□□ 1.16
SHANK2Q9UPX8 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
SHANK2Q9UPX8 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SHANK2Q9UPX8 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SHANK2Q9UPX8 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
SHANK2Q9UPX8 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SHANK2Q9UPX8 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
SHANK2Q9UPX8 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
SHANK2Q9UPX8 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SHANK2Q9UPX8 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC22.28■■□□□ 1.16
SHANK2Q9UPX8 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC22.28■■□□□ 1.16
SHANK2Q9UPX8 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SHANK2Q9UPX8 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC22.28■■□□□ 1.16
SHANK2Q9UPX8 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
SHANK2Q9UPX8 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC22.28■■□□□ 1.16
SHANK2Q9UPX8 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC22.28■■□□□ 1.16
SHANK2Q9UPX8 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC22.28■■□□□ 1.16
SHANK2Q9UPX8 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC22.28■■□□□ 1.16
SHANK2Q9UPX8 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC22.28■■□□□ 1.16
SHANK2Q9UPX8 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
SHANK2Q9UPX8 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
SHANK2Q9UPX8 AC133540.1-201ENST00000620845 1019 ntBASIC22.28■■□□□ 1.16
SHANK2Q9UPX8 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SHANK2Q9UPX8 NAP1L6-202ENST00000641404 1222 ntBASIC22.28■■□□□ 1.16
SHANK2Q9UPX8 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
SHANK2Q9UPX8 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SHANK2Q9UPX8 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
SHANK2Q9UPX8 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SHANK2Q9UPX8 KRT8P21-201ENST00000430398 1491 ntBASIC22.27■■□□□ 1.16
SHANK2Q9UPX8 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC22.27■■□□□ 1.16
SHANK2Q9UPX8 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
SHANK2Q9UPX8 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC22.27■■□□□ 1.16
SHANK2Q9UPX8 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SHANK2Q9UPX8 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
SHANK2Q9UPX8 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SHANK2Q9UPX8 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SHANK2Q9UPX8 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SHANK2Q9UPX8 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SHANK2Q9UPX8 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
SHANK2Q9UPX8 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
SHANK2Q9UPX8 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SHANK2Q9UPX8 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
SHANK2Q9UPX8 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC22.27■■□□□ 1.16
SHANK2Q9UPX8 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC22.27■■□□□ 1.16
SHANK2Q9UPX8 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC22.27■■□□□ 1.16
SHANK2Q9UPX8 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SHANK2Q9UPX8 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SHANK2Q9UPX8 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC22.27■■□□□ 1.16
SHANK2Q9UPX8 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC22.27■■□□□ 1.16
SHANK2Q9UPX8 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SHANK2Q9UPX8 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SHANK2Q9UPX8 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
SHANK2Q9UPX8 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC22.27■■□□□ 1.16
SHANK2Q9UPX8 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC22.27■■□□□ 1.16
SHANK2Q9UPX8 Z97180.1-201ENST00000445173 988 ntBASIC22.27■■□□□ 1.16
SHANK2Q9UPX8 AC012618.1-201ENST00000461223 412 ntBASIC22.27■■□□□ 1.16
SHANK2Q9UPX8 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC22.27■■□□□ 1.16
SHANK2Q9UPX8 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC22.27■■□□□ 1.16
SHANK2Q9UPX8 STUB1-204ENST00000564370 875 ntTSL 2 BASIC22.27■■□□□ 1.16
SHANK2Q9UPX8 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
SHANK2Q9UPX8 AC009884.2-201ENST00000603110 324 ntBASIC22.27■■□□□ 1.16
SHANK2Q9UPX8 RN7SL736P-201ENST00000613111 269 ntBASIC22.27■■□□□ 1.16
SHANK2Q9UPX8 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC22.27■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms