Protein–RNA interactions for Protein: Q9P0U4

CXXC1, CXXC-type zinc finger protein 1, humanhuman

Predicted RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1Q9P0U4 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CXXC1Q9P0U4 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CXXC1Q9P0U4 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
CXXC1Q9P0U4 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CXXC1Q9P0U4 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CXXC1Q9P0U4 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
CXXC1Q9P0U4 MST1L-201ENST00000442552 2185 ntBASIC16.26■□□□□ 0.19
CXXC1Q9P0U4 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CXXC1Q9P0U4 AC136759.1-202ENST00000530858 2194 ntBASIC16.26■□□□□ 0.19
CXXC1Q9P0U4 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CXXC1Q9P0U4 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CXXC1Q9P0U4 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.26■□□□□ 0.19
CXXC1Q9P0U4 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
CXXC1Q9P0U4 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CXXC1Q9P0U4 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.25■□□□□ 0.19
CXXC1Q9P0U4 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CXXC1Q9P0U4 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CXXC1Q9P0U4 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CXXC1Q9P0U4 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC16.25■□□□□ 0.19
CXXC1Q9P0U4 AL008718.2-201ENST00000609206 1313 ntBASIC16.25■□□□□ 0.19
CXXC1Q9P0U4 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CXXC1Q9P0U4 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CXXC1Q9P0U4 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.25■□□□□ 0.19
CXXC1Q9P0U4 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CXXC1Q9P0U4 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CXXC1Q9P0U4 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.25■□□□□ 0.19
CXXC1Q9P0U4 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.25■□□□□ 0.19
CXXC1Q9P0U4 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.25■□□□□ 0.19
CXXC1Q9P0U4 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
CXXC1Q9P0U4 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CXXC1Q9P0U4 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CXXC1Q9P0U4 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CXXC1Q9P0U4 NAGK-204ENST00000443872 878 ntTSL 3 BASIC16.25■□□□□ 0.19
CXXC1Q9P0U4 PIN4P1-201ENST00000451079 396 ntBASIC16.25■□□□□ 0.19
CXXC1Q9P0U4 AL096772.1-201ENST00000451135 781 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CXXC1Q9P0U4 RN7SL258P-201ENST00000478664 300 ntBASIC16.25■□□□□ 0.19
CXXC1Q9P0U4 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC16.25■□□□□ 0.19
CXXC1Q9P0U4 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CXXC1Q9P0U4 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC16.25■□□□□ 0.19
CXXC1Q9P0U4 RBM8B-201ENST00000555532 525 ntBASIC16.25■□□□□ 0.19
CXXC1Q9P0U4 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC16.25■□□□□ 0.19
CXXC1Q9P0U4 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CXXC1Q9P0U4 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC16.25■□□□□ 0.19
CXXC1Q9P0U4 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CXXC1Q9P0U4 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CXXC1Q9P0U4 MEG3_2.1-201ENST00000611456 105 ntBASIC16.25■□□□□ 0.19
CXXC1Q9P0U4 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC16.25■□□□□ 0.19
CXXC1Q9P0U4 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC16.25■□□□□ 0.19
CXXC1Q9P0U4 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC16.25■□□□□ 0.19
CXXC1Q9P0U4 AL589935.2-201ENST00000616471 1231 ntBASIC16.25■□□□□ 0.19
CXXC1Q9P0U4 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CXXC1Q9P0U4 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CXXC1Q9P0U4 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CXXC1Q9P0U4 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CXXC1Q9P0U4 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
CXXC1Q9P0U4 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CXXC1Q9P0U4 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CXXC1Q9P0U4 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CXXC1Q9P0U4 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CXXC1Q9P0U4 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CXXC1Q9P0U4 AC011840.2-201ENST00000563063 1520 ntBASIC16.24■□□□□ 0.19
CXXC1Q9P0U4 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.24■□□□□ 0.19
CXXC1Q9P0U4 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.24■□□□□ 0.19
CXXC1Q9P0U4 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
CXXC1Q9P0U4 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CXXC1Q9P0U4 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC16.24■□□□□ 0.19
CXXC1Q9P0U4 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CXXC1Q9P0U4 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CXXC1Q9P0U4 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CXXC1Q9P0U4 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CXXC1Q9P0U4 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
CXXC1Q9P0U4 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CXXC1Q9P0U4 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CXXC1Q9P0U4 AL512430.1-201ENST00000392575 860 ntBASIC16.24■□□□□ 0.19
CXXC1Q9P0U4 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC16.24■□□□□ 0.19
CXXC1Q9P0U4 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC16.24■□□□□ 0.19
CXXC1Q9P0U4 IGHV3-37-201ENST00000518544 340 ntBASIC16.24■□□□□ 0.19
CXXC1Q9P0U4 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC16.24■□□□□ 0.19
CXXC1Q9P0U4 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC16.24■□□□□ 0.19
CXXC1Q9P0U4 MIR3677-201ENST00000578964 60 ntBASIC16.24■□□□□ 0.19
CXXC1Q9P0U4 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC16.24■□□□□ 0.19
CXXC1Q9P0U4 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC16.24■□□□□ 0.19
CXXC1Q9P0U4 AC138696.2-201ENST00000607376 223 ntBASIC16.24■□□□□ 0.19
CXXC1Q9P0U4 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CXXC1Q9P0U4 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CXXC1Q9P0U4 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.24■□□□□ 0.19
CXXC1Q9P0U4 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
CXXC1Q9P0U4 FAM90A2P-201ENST00000511144 1395 ntBASIC16.24■□□□□ 0.19
CXXC1Q9P0U4 FAM90A25P-201ENST00000528404 1395 ntBASIC16.24■□□□□ 0.19
CXXC1Q9P0U4 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CXXC1Q9P0U4 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CXXC1Q9P0U4 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CXXC1Q9P0U4 AC127383.1-201ENST00000444697 1800 ntBASIC16.24■□□□□ 0.19
CXXC1Q9P0U4 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
CXXC1Q9P0U4 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.24■□□□□ 0.19
CXXC1Q9P0U4 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.24■□□□□ 0.19
CXXC1Q9P0U4 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.24■□□□□ 0.19
CXXC1Q9P0U4 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
CXXC1Q9P0U4 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.23■□□□□ 0.19
CXXC1Q9P0U4 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms