Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC19.75■□□□□ 0.75
ABCA3Q99758 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ABCA3Q99758 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.75■□□□□ 0.75
ABCA3Q99758 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
ABCA3Q99758 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
ABCA3Q99758 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC19.75■□□□□ 0.75
ABCA3Q99758 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
ABCA3Q99758 SALL4P5-201ENST00000419001 1760 ntBASIC19.75■□□□□ 0.75
ABCA3Q99758 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ABCA3Q99758 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
ABCA3Q99758 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
ABCA3Q99758 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
ABCA3Q99758 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC19.74■□□□□ 0.75
ABCA3Q99758 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ABCA3Q99758 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ABCA3Q99758 JTB-202ENST00000356648 1040 ntTSL 2 BASIC19.74■□□□□ 0.75
ABCA3Q99758 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC19.74■□□□□ 0.75
ABCA3Q99758 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ABCA3Q99758 CD164-210ENST00000512821 964 ntTSL 2 BASIC19.74■□□□□ 0.75
ABCA3Q99758 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
ABCA3Q99758 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC19.74■□□□□ 0.75
ABCA3Q99758 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ABCA3Q99758 AC011471.3-201ENST00000623576 402 ntBASIC19.74■□□□□ 0.75
ABCA3Q99758 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ABCA3Q99758 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC19.74■□□□□ 0.75
ABCA3Q99758 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
ABCA3Q99758 PCDHB19P-201ENST00000570871 2371 ntBASIC19.74■□□□□ 0.75
ABCA3Q99758 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ABCA3Q99758 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
ABCA3Q99758 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
ABCA3Q99758 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC19.74■□□□□ 0.75
ABCA3Q99758 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC19.74■□□□□ 0.75
ABCA3Q99758 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC19.74■□□□□ 0.75
ABCA3Q99758 SUPT20HL2-201ENST00000486479 2409 ntBASIC19.74■□□□□ 0.75
ABCA3Q99758 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ABCA3Q99758 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC19.74■□□□□ 0.75
ABCA3Q99758 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ABCA3Q99758 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
ABCA3Q99758 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ABCA3Q99758 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ABCA3Q99758 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
ABCA3Q99758 Z69890.1-201ENST00000382990 339 ntBASIC19.73■□□□□ 0.75
ABCA3Q99758 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC19.73■□□□□ 0.75
ABCA3Q99758 AC108734.2-201ENST00000420887 1069 ntBASIC19.73■□□□□ 0.75
ABCA3Q99758 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC19.73■□□□□ 0.75
ABCA3Q99758 GCSHP3-201ENST00000431120 391 ntBASIC19.73■□□□□ 0.75
ABCA3Q99758 RGS5-216ENST00000449680 788 ntTSL 3 BASIC19.73■□□□□ 0.75
ABCA3Q99758 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC19.73■□□□□ 0.75
ABCA3Q99758 AC084752.1-201ENST00000509766 622 ntBASIC19.73■□□□□ 0.75
ABCA3Q99758 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC19.73■□□□□ 0.75
ABCA3Q99758 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ABCA3Q99758 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC19.73■□□□□ 0.75
ABCA3Q99758 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC19.73■□□□□ 0.75
ABCA3Q99758 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ABCA3Q99758 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ABCA3Q99758 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC19.73■□□□□ 0.75
ABCA3Q99758 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
ABCA3Q99758 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
ABCA3Q99758 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ABCA3Q99758 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ABCA3Q99758 AP000845.1-201ENST00000581677 2131 ntBASIC19.73■□□□□ 0.75
ABCA3Q99758 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC19.73■□□□□ 0.75
ABCA3Q99758 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ABCA3Q99758 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC19.73■□□□□ 0.75
ABCA3Q99758 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ABCA3Q99758 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ABCA3Q99758 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
ABCA3Q99758 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ABCA3Q99758 AC073869.2-201ENST00000417338 1026 ntBASIC19.73■□□□□ 0.75
ABCA3Q99758 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC19.73■□□□□ 0.75
ABCA3Q99758 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC19.73■□□□□ 0.75
ABCA3Q99758 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ABCA3Q99758 AC003686.1-201ENST00000550956 1034 ntBASIC19.73■□□□□ 0.75
ABCA3Q99758 RN7SL665P-201ENST00000578793 300 ntBASIC19.73■□□□□ 0.75
ABCA3Q99758 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ABCA3Q99758 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC19.73■□□□□ 0.75
ABCA3Q99758 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ABCA3Q99758 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC19.73■□□□□ 0.75
ABCA3Q99758 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ABCA3Q99758 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ABCA3Q99758 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ABCA3Q99758 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC19.72■□□□□ 0.75
ABCA3Q99758 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ABCA3Q99758 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
ABCA3Q99758 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
ABCA3Q99758 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ABCA3Q99758 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC19.72■□□□□ 0.75
ABCA3Q99758 AC106047.2-201ENST00000511723 743 ntBASIC19.72■□□□□ 0.75
ABCA3Q99758 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ABCA3Q99758 IGHVIII-5-2-201ENST00000522505 261 ntBASIC19.72■□□□□ 0.75
ABCA3Q99758 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC19.72■□□□□ 0.75
ABCA3Q99758 RPS5-204ENST00000598098 536 ntTSL 2 BASIC19.72■□□□□ 0.75
ABCA3Q99758 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC19.72■□□□□ 0.75
ABCA3Q99758 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ABCA3Q99758 AC010976.2-201ENST00000609697 852 ntBASIC19.72■□□□□ 0.75
ABCA3Q99758 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC19.72■□□□□ 0.75
ABCA3Q99758 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ABCA3Q99758 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ABCA3Q99758 AC106820.2-201ENST00000563775 3264 ntBASIC19.72■□□□□ 0.75
ABCA3Q99758 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 318.5 ms