Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC10.24□□□□□ -0.77
LITAFQ99732 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC10.24□□□□□ -0.77
LITAFQ99732 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
LITAFQ99732 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
LITAFQ99732 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
LITAFQ99732 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC10.23□□□□□ -0.77
LITAFQ99732 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC10.23□□□□□ -0.77
LITAFQ99732 MIR600HG-201ENST00000449175 5984 ntBASIC10.23□□□□□ -0.77
LITAFQ99732 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC10.23□□□□□ -0.77
LITAFQ99732 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC10.23□□□□□ -0.77
LITAFQ99732 ADK-205ENST00000539909 1866 ntTSL 2 BASIC10.23□□□□□ -0.77
LITAFQ99732 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
LITAFQ99732 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
LITAFQ99732 TCAM1P-207ENST00000485295 1537 ntBASIC10.23□□□□□ -0.77
LITAFQ99732 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC10.23□□□□□ -0.77
LITAFQ99732 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
LITAFQ99732 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
LITAFQ99732 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC10.23□□□□□ -0.77
LITAFQ99732 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC10.23□□□□□ -0.77
LITAFQ99732 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
LITAFQ99732 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
LITAFQ99732 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
LITAFQ99732 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
LITAFQ99732 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
LITAFQ99732 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
LITAFQ99732 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
LITAFQ99732 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
LITAFQ99732 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
LITAFQ99732 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC10.23□□□□□ -0.77
LITAFQ99732 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
LITAFQ99732 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC10.23□□□□□ -0.77
LITAFQ99732 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC10.23□□□□□ -0.77
LITAFQ99732 AC104457.1-201ENST00000401024 814 ntBASIC10.23□□□□□ -0.77
LITAFQ99732 AL031133.1-201ENST00000406807 723 ntBASIC10.23□□□□□ -0.77
LITAFQ99732 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC10.23□□□□□ -0.77
LITAFQ99732 FAM86EP-206ENST00000510506 987 ntBASIC10.23□□□□□ -0.77
LITAFQ99732 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC10.23□□□□□ -0.77
LITAFQ99732 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC10.23□□□□□ -0.77
LITAFQ99732 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC10.23□□□□□ -0.77
LITAFQ99732 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC10.23□□□□□ -0.77
LITAFQ99732 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC10.23□□□□□ -0.77
LITAFQ99732 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC10.23□□□□□ -0.77
LITAFQ99732 AC021087.4-201ENST00000563761 564 ntBASIC10.23□□□□□ -0.77
LITAFQ99732 PNMT-203ENST00000581428 677 ntTSL 2 BASIC10.23□□□□□ -0.77
LITAFQ99732 AC004790.2-201ENST00000623588 572 ntBASIC10.23□□□□□ -0.77
LITAFQ99732 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
LITAFQ99732 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
LITAFQ99732 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC10.23□□□□□ -0.77
LITAFQ99732 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
LITAFQ99732 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC10.23□□□□□ -0.77
LITAFQ99732 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC10.23□□□□□ -0.77
LITAFQ99732 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
LITAFQ99732 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
LITAFQ99732 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
LITAFQ99732 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC10.23□□□□□ -0.77
LITAFQ99732 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
LITAFQ99732 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
LITAFQ99732 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
LITAFQ99732 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
LITAFQ99732 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
LITAFQ99732 AL139385.1-201ENST00000611744 3272 ntBASIC10.23□□□□□ -0.77
LITAFQ99732 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
LITAFQ99732 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
LITAFQ99732 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
LITAFQ99732 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
LITAFQ99732 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
LITAFQ99732 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
LITAFQ99732 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
LITAFQ99732 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC10.23□□□□□ -0.77
LITAFQ99732 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC10.23□□□□□ -0.77
LITAFQ99732 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC10.23□□□□□ -0.77
LITAFQ99732 MED25-212ENST00000618715 1467 ntTSL 5 BASIC10.23□□□□□ -0.77
LITAFQ99732 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
LITAFQ99732 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC10.23□□□□□ -0.77
LITAFQ99732 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
LITAFQ99732 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
LITAFQ99732 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
LITAFQ99732 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
LITAFQ99732 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
LITAFQ99732 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LITAFQ99732 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LITAFQ99732 AGGF1P1-201ENST00000509500 2073 ntBASIC10.22□□□□□ -0.77
LITAFQ99732 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC10.22□□□□□ -0.77
LITAFQ99732 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
LITAFQ99732 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
LITAFQ99732 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LITAFQ99732 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
LITAFQ99732 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LITAFQ99732 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC10.22□□□□□ -0.77
LITAFQ99732 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC10.22□□□□□ -0.77
LITAFQ99732 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LITAFQ99732 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC10.22□□□□□ -0.77
LITAFQ99732 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LITAFQ99732 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
LITAFQ99732 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
LITAFQ99732 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
LITAFQ99732 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
LITAFQ99732 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
LITAFQ99732 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LITAFQ99732 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms