Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 PROK2-201ENST00000295619 1022 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
IFT140Q96RY7 KRT17P5-201ENST00000332088 839 ntBASIC24.59■■□□□ 1.53
IFT140Q96RY7 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC24.59■■□□□ 1.53
IFT140Q96RY7 MIR566-201ENST00000385187 94 ntBASIC24.59■■□□□ 1.53
IFT140Q96RY7 MIR645-201ENST00000385283 94 ntBASIC24.59■■□□□ 1.53
IFT140Q96RY7 KRT18P46-201ENST00000435568 1279 ntBASIC24.59■■□□□ 1.53
IFT140Q96RY7 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
IFT140Q96RY7 AC090001.1-201ENST00000553194 467 ntTSL 3 BASIC24.59■■□□□ 1.53
IFT140Q96RY7 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
IFT140Q96RY7 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
IFT140Q96RY7 TP53-221ENST00000615910 1149 ntTSL 5 BASIC24.59■■□□□ 1.53
IFT140Q96RY7 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC24.59■■□□□ 1.53
IFT140Q96RY7 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
IFT140Q96RY7 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
IFT140Q96RY7 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
IFT140Q96RY7 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
IFT140Q96RY7 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
IFT140Q96RY7 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
IFT140Q96RY7 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
IFT140Q96RY7 AC021305.1-201ENST00000520656 1514 ntBASIC24.59■■□□□ 1.53
IFT140Q96RY7 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
IFT140Q96RY7 AC018470.1-201ENST00000624790 3129 ntBASIC24.59■■□□□ 1.53
IFT140Q96RY7 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
IFT140Q96RY7 AC108734.2-201ENST00000420887 1069 ntBASIC24.58■■□□□ 1.53
IFT140Q96RY7 OST4-201ENST00000429985 559 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.53
IFT140Q96RY7 LINC01278-201ENST00000433061 529 ntTSL 3 BASIC24.58■■□□□ 1.53
IFT140Q96RY7 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC24.58■■□□□ 1.53
IFT140Q96RY7 AC083801.1-201ENST00000491689 358 ntBASIC24.58■■□□□ 1.53
IFT140Q96RY7 CISD2-202ENST00000503643 808 ntTSL 2 BASIC24.58■■□□□ 1.53
IFT140Q96RY7 GDNF-207ENST00000515058 764 ntTSL 5 BASIC24.58■■□□□ 1.53
IFT140Q96RY7 USB1-205ENST00000561743 1135 ntTSL 3 BASIC24.58■■□□□ 1.53
IFT140Q96RY7 ANAPC11-221ENST00000584314 559 ntTSL 2 BASIC24.58■■□□□ 1.53
IFT140Q96RY7 LINC01278-206ENST00000610088 554 ntTSL 4 BASIC24.58■■□□□ 1.53
IFT140Q96RY7 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
IFT140Q96RY7 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
IFT140Q96RY7 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
IFT140Q96RY7 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC24.58■■□□□ 1.53
IFT140Q96RY7 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
IFT140Q96RY7 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
IFT140Q96RY7 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC24.58■■□□□ 1.53
IFT140Q96RY7 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC24.58■■□□□ 1.53
IFT140Q96RY7 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
IFT140Q96RY7 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
IFT140Q96RY7 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC24.58■■□□□ 1.52
IFT140Q96RY7 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
IFT140Q96RY7 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
IFT140Q96RY7 JAZF1-AS1-201ENST00000436758 548 ntTSL 2 BASIC24.58■■□□□ 1.52
IFT140Q96RY7 GNG10P1-201ENST00000452289 199 ntBASIC24.58■■□□□ 1.52
IFT140Q96RY7 RN7SL530P-201ENST00000485097 298 ntBASIC24.58■■□□□ 1.52
IFT140Q96RY7 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC24.58■■□□□ 1.52
IFT140Q96RY7 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC24.58■■□□□ 1.52
IFT140Q96RY7 KRT8P1-201ENST00000557533 1207 ntBASIC24.58■■□□□ 1.52
IFT140Q96RY7 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC24.58■■□□□ 1.52
IFT140Q96RY7 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC24.58■■□□□ 1.52
IFT140Q96RY7 MIR6746-201ENST00000620971 63 ntBASIC24.58■■□□□ 1.52
IFT140Q96RY7 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC24.58■■□□□ 1.52
IFT140Q96RY7 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC24.58■■□□□ 1.52
IFT140Q96RY7 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC24.58■■□□□ 1.52
IFT140Q96RY7 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC24.57■■□□□ 1.52
IFT140Q96RY7 API5-202ENST00000420461 2009 ntTSL 2 BASIC24.57■■□□□ 1.52
IFT140Q96RY7 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
IFT140Q96RY7 AC007292.2-201ENST00000593524 1812 ntBASIC24.57■■□□□ 1.52
IFT140Q96RY7 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
IFT140Q96RY7 ENPP7P8-202ENST00000527856 1345 ntBASIC24.57■■□□□ 1.52
IFT140Q96RY7 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC24.57■■□□□ 1.52
IFT140Q96RY7 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC24.57■■□□□ 1.52
IFT140Q96RY7 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC24.57■■□□□ 1.52
IFT140Q96RY7 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
IFT140Q96RY7 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
IFT140Q96RY7 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC24.57■■□□□ 1.52
IFT140Q96RY7 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
IFT140Q96RY7 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC24.57■■□□□ 1.52
IFT140Q96RY7 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC24.57■■□□□ 1.52
IFT140Q96RY7 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
IFT140Q96RY7 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
IFT140Q96RY7 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC24.57■■□□□ 1.52
IFT140Q96RY7 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC24.57■■□□□ 1.52
IFT140Q96RY7 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC24.57■■□□□ 1.52
IFT140Q96RY7 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC24.57■■□□□ 1.52
IFT140Q96RY7 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC24.57■■□□□ 1.52
IFT140Q96RY7 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC24.57■■□□□ 1.52
IFT140Q96RY7 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC24.57■■□□□ 1.52
IFT140Q96RY7 AL118522.1-201ENST00000611368 560 ntBASIC24.57■■□□□ 1.52
IFT140Q96RY7 PROX1-AS1-235ENST00000628896 711 ntTSL 5 BASIC24.57■■□□□ 1.52
IFT140Q96RY7 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC24.56■■□□□ 1.52
IFT140Q96RY7 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
IFT140Q96RY7 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC24.56■■□□□ 1.52
IFT140Q96RY7 AC012508.2-201ENST00000567613 1472 ntBASIC24.56■■□□□ 1.52
IFT140Q96RY7 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC24.56■■□□□ 1.52
IFT140Q96RY7 FTX-216ENST00000638985 1367 ntTSL 5 BASIC24.56■■□□□ 1.52
IFT140Q96RY7 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC24.56■■□□□ 1.52
IFT140Q96RY7 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC24.56■■□□□ 1.52
IFT140Q96RY7 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
IFT140Q96RY7 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
IFT140Q96RY7 PRKAR2A-AS1-203ENST00000431705 592 ntTSL 4 BASIC24.56■■□□□ 1.52
IFT140Q96RY7 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
IFT140Q96RY7 RPL18AP8-201ENST00000486071 528 ntBASIC24.56■■□□□ 1.52
IFT140Q96RY7 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC24.56■■□□□ 1.52
IFT140Q96RY7 AC226150.1-201ENST00000544259 466 ntBASIC24.56■■□□□ 1.52
IFT140Q96RY7 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC24.56■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms