Protein–RNA interactions for Protein: Q96PB8

LRRC3B, Leucine-rich repeat-containing protein 3B, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3BQ96PB8 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.07
LRRC3BQ96PB8 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
LRRC3BQ96PB8 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.07
LRRC3BQ96PB8 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
LRRC3BQ96PB8 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
LRRC3BQ96PB8 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
LRRC3BQ96PB8 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.52■□□□□ 0.07
LRRC3BQ96PB8 E2F3P2-201ENST00000447755 1422 ntBASIC15.51■□□□□ 0.07
LRRC3BQ96PB8 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LRRC3BQ96PB8 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRRC3BQ96PB8 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LRRC3BQ96PB8 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRRC3BQ96PB8 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC15.51■□□□□ 0.07
LRRC3BQ96PB8 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC15.51■□□□□ 0.07
LRRC3BQ96PB8 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
LRRC3BQ96PB8 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LRRC3BQ96PB8 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LRRC3BQ96PB8 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRRC3BQ96PB8 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRRC3BQ96PB8 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRRC3BQ96PB8 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRRC3BQ96PB8 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
LRRC3BQ96PB8 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRRC3BQ96PB8 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LRRC3BQ96PB8 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRRC3BQ96PB8 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
LRRC3BQ96PB8 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LRRC3BQ96PB8 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LRRC3BQ96PB8 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRRC3BQ96PB8 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC15.51■□□□□ 0.07
LRRC3BQ96PB8 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LRRC3BQ96PB8 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC15.51■□□□□ 0.07
LRRC3BQ96PB8 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRRC3BQ96PB8 AC245884.6-201ENST00000515672 1067 ntBASIC15.51■□□□□ 0.07
LRRC3BQ96PB8 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRRC3BQ96PB8 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC15.51■□□□□ 0.07
LRRC3BQ96PB8 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC15.51■□□□□ 0.07
LRRC3BQ96PB8 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LRRC3BQ96PB8 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
LRRC3BQ96PB8 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRRC3BQ96PB8 HCG18-245ENST00000602550 559 ntTSL 4 BASIC15.51■□□□□ 0.07
LRRC3BQ96PB8 AC026740.1-201ENST00000607068 791 ntBASIC15.51■□□□□ 0.07
LRRC3BQ96PB8 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC15.51■□□□□ 0.07
LRRC3BQ96PB8 CU633904.3-201ENST00000624042 1029 ntBASIC15.51■□□□□ 0.07
LRRC3BQ96PB8 AC002472.3-201ENST00000640124 621 ntBASIC15.51■□□□□ 0.07
LRRC3BQ96PB8 AC068587.8-201ENST00000641239 219 ntBASIC15.51■□□□□ 0.07
LRRC3BQ96PB8 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRRC3BQ96PB8 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC15.51■□□□□ 0.07
LRRC3BQ96PB8 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRRC3BQ96PB8 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRRC3BQ96PB8 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRRC3BQ96PB8 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRRC3BQ96PB8 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRRC3BQ96PB8 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRRC3BQ96PB8 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LRRC3BQ96PB8 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LRRC3BQ96PB8 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC15.51■□□□□ 0.07
LRRC3BQ96PB8 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
LRRC3BQ96PB8 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LRRC3BQ96PB8 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LRRC3BQ96PB8 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
LRRC3BQ96PB8 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRRC3BQ96PB8 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.51■□□□□ 0.07
LRRC3BQ96PB8 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
LRRC3BQ96PB8 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRRC3BQ96PB8 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
LRRC3BQ96PB8 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRRC3BQ96PB8 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRRC3BQ96PB8 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRRC3BQ96PB8 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRRC3BQ96PB8 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRRC3BQ96PB8 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC15.5■□□□□ 0.07
LRRC3BQ96PB8 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.5■□□□□ 0.07
LRRC3BQ96PB8 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
LRRC3BQ96PB8 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.5■□□□□ 0.07
LRRC3BQ96PB8 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC15.5■□□□□ 0.07
LRRC3BQ96PB8 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LRRC3BQ96PB8 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRRC3BQ96PB8 GGCT-203ENST00000409144 836 ntTSL 2 BASIC15.5■□□□□ 0.07
LRRC3BQ96PB8 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LRRC3BQ96PB8 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC15.5■□□□□ 0.07
LRRC3BQ96PB8 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LRRC3BQ96PB8 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC15.5■□□□□ 0.07
LRRC3BQ96PB8 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LRRC3BQ96PB8 RN7SL11P-201ENST00000471305 293 ntBASIC15.5■□□□□ 0.07
LRRC3BQ96PB8 RN7SL720P-201ENST00000488178 304 ntBASIC15.5■□□□□ 0.07
LRRC3BQ96PB8 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC15.5■□□□□ 0.07
LRRC3BQ96PB8 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC15.5■□□□□ 0.07
LRRC3BQ96PB8 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LRRC3BQ96PB8 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC15.5■□□□□ 0.07
LRRC3BQ96PB8 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRRC3BQ96PB8 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC15.5■□□□□ 0.07
LRRC3BQ96PB8 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRRC3BQ96PB8 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRRC3BQ96PB8 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRRC3BQ96PB8 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
LRRC3BQ96PB8 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC15.5■□□□□ 0.07
LRRC3BQ96PB8 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRRC3BQ96PB8 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LRRC3BQ96PB8 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms