Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CHD5Q8TDI0 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CHD5Q8TDI0 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CHD5Q8TDI0 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CHD5Q8TDI0 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CHD5Q8TDI0 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.36■□□□□ 0.05
CHD5Q8TDI0 AP000593.2-201ENST00000542775 1433 ntBASIC15.36■□□□□ 0.05
CHD5Q8TDI0 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CHD5Q8TDI0 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CHD5Q8TDI0 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC15.36■□□□□ 0.05
CHD5Q8TDI0 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CHD5Q8TDI0 MIR658-201ENST00000385210 100 ntBASIC15.36■□□□□ 0.05
CHD5Q8TDI0 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
CHD5Q8TDI0 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
CHD5Q8TDI0 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CHD5Q8TDI0 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC15.36■□□□□ 0.05
CHD5Q8TDI0 AC007551.1-201ENST00000457394 519 ntBASIC15.36■□□□□ 0.05
CHD5Q8TDI0 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC15.36■□□□□ 0.05
CHD5Q8TDI0 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC15.36■□□□□ 0.05
CHD5Q8TDI0 FTLP10-202ENST00000505798 471 ntBASIC15.36■□□□□ 0.05
CHD5Q8TDI0 AC022616.1-201ENST00000518688 554 ntBASIC15.36■□□□□ 0.05
CHD5Q8TDI0 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC15.36■□□□□ 0.05
CHD5Q8TDI0 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC15.36■□□□□ 0.05
CHD5Q8TDI0 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC15.36■□□□□ 0.05
CHD5Q8TDI0 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
CHD5Q8TDI0 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CHD5Q8TDI0 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
CHD5Q8TDI0 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC15.36■□□□□ 0.05
CHD5Q8TDI0 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.36■□□□□ 0.05
CHD5Q8TDI0 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CHD5Q8TDI0 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CHD5Q8TDI0 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC15.36■□□□□ 0.05
CHD5Q8TDI0 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CHD5Q8TDI0 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CHD5Q8TDI0 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.35■□□□□ 0.05
CHD5Q8TDI0 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
CHD5Q8TDI0 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
CHD5Q8TDI0 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CHD5Q8TDI0 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CHD5Q8TDI0 PGGT1BP2-201ENST00000398621 1028 ntBASIC15.35■□□□□ 0.05
CHD5Q8TDI0 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CHD5Q8TDI0 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
CHD5Q8TDI0 AL355994.2-201ENST00000447882 704 ntBASIC15.35■□□□□ 0.05
CHD5Q8TDI0 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CHD5Q8TDI0 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC15.35■□□□□ 0.05
CHD5Q8TDI0 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC15.35■□□□□ 0.05
CHD5Q8TDI0 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CHD5Q8TDI0 MIR4783-201ENST00000580343 82 ntBASIC15.35■□□□□ 0.05
CHD5Q8TDI0 ZACNP1-201ENST00000612259 710 ntBASIC15.35■□□□□ 0.05
CHD5Q8TDI0 AC009542.2-202ENST00000619004 1067 ntBASIC15.35■□□□□ 0.05
CHD5Q8TDI0 PFAS-212ENST00000625942 396 ntTSL 5 BASIC15.35■□□□□ 0.05
CHD5Q8TDI0 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC15.35■□□□□ 0.05
CHD5Q8TDI0 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CHD5Q8TDI0 AJ011931.1-201ENST00000618749 2492 ntBASIC15.35■□□□□ 0.05
CHD5Q8TDI0 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CHD5Q8TDI0 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CHD5Q8TDI0 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CHD5Q8TDI0 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
CHD5Q8TDI0 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CHD5Q8TDI0 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CHD5Q8TDI0 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CHD5Q8TDI0 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.35■□□□□ 0.05
CHD5Q8TDI0 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
CHD5Q8TDI0 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CHD5Q8TDI0 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
CHD5Q8TDI0 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
CHD5Q8TDI0 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CHD5Q8TDI0 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
CHD5Q8TDI0 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.35■□□□□ 0.05
CHD5Q8TDI0 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
CHD5Q8TDI0 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
CHD5Q8TDI0 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC15.35■□□□□ 0.05
CHD5Q8TDI0 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
CHD5Q8TDI0 RPS2P32-201ENST00000439199 892 ntBASIC15.35■□□□□ 0.05
CHD5Q8TDI0 KLF2P4-201ENST00000451959 1225 ntBASIC15.35■□□□□ 0.05
CHD5Q8TDI0 BNIP3P42-201ENST00000454982 569 ntBASIC15.35■□□□□ 0.05
CHD5Q8TDI0 PFN2-215ENST00000497148 743 ntTSL 4 BASIC15.35■□□□□ 0.05
CHD5Q8TDI0 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CHD5Q8TDI0 BNIP3P29-201ENST00000598302 571 ntBASIC15.35■□□□□ 0.05
CHD5Q8TDI0 AC011447.5-201ENST00000616168 564 ntBASIC15.35■□□□□ 0.05
CHD5Q8TDI0 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC15.35■□□□□ 0.05
CHD5Q8TDI0 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC15.34■□□□□ 0.05
CHD5Q8TDI0 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CHD5Q8TDI0 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CHD5Q8TDI0 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CHD5Q8TDI0 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CHD5Q8TDI0 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CHD5Q8TDI0 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CHD5Q8TDI0 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.34■□□□□ 0.05
CHD5Q8TDI0 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CHD5Q8TDI0 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC15.34■□□□□ 0.05
CHD5Q8TDI0 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CHD5Q8TDI0 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CHD5Q8TDI0 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CHD5Q8TDI0 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CHD5Q8TDI0 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC15.34■□□□□ 0.05
CHD5Q8TDI0 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CHD5Q8TDI0 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC15.34■□□□□ 0.05
CHD5Q8TDI0 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CHD5Q8TDI0 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms