Protein–RNA interactions for Protein: Q8N4S0

CCDC82, Coiled-coil domain-containing protein 82, humanhuman

Predictions only

Length 544 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC82Q8N4S0 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC82Q8N4S0 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC17.93■□□□□ 0.46
CCDC82Q8N4S0 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CCDC82Q8N4S0 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC82Q8N4S0 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC82Q8N4S0 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CCDC82Q8N4S0 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC82Q8N4S0 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC82Q8N4S0 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC82Q8N4S0 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC82Q8N4S0 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC82Q8N4S0 C1QBPP1-201ENST00000400117 770 ntBASIC17.93■□□□□ 0.46
CCDC82Q8N4S0 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
CCDC82Q8N4S0 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC17.93■□□□□ 0.46
CCDC82Q8N4S0 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC17.93■□□□□ 0.46
CCDC82Q8N4S0 GAPDHP40-201ENST00000505218 1006 ntBASIC17.93■□□□□ 0.46
CCDC82Q8N4S0 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
CCDC82Q8N4S0 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC17.93■□□□□ 0.46
CCDC82Q8N4S0 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC17.93■□□□□ 0.46
CCDC82Q8N4S0 AC120045.2-201ENST00000567334 178 ntBASIC17.93■□□□□ 0.46
CCDC82Q8N4S0 PAM16-204ENST00000571941 674 ntTSL 3 BASIC17.93■□□□□ 0.46
CCDC82Q8N4S0 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC17.93■□□□□ 0.46
CCDC82Q8N4S0 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CCDC82Q8N4S0 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC17.93■□□□□ 0.46
CCDC82Q8N4S0 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC17.93■□□□□ 0.46
CCDC82Q8N4S0 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC17.93■□□□□ 0.46
CCDC82Q8N4S0 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
CCDC82Q8N4S0 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC17.93■□□□□ 0.46
CCDC82Q8N4S0 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC17.93■□□□□ 0.46
CCDC82Q8N4S0 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC82Q8N4S0 MECR-202ENST00000373791 2416 ntTSL 2 BASIC17.93■□□□□ 0.46
CCDC82Q8N4S0 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC17.93■□□□□ 0.46
CCDC82Q8N4S0 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC82Q8N4S0 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC82Q8N4S0 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC82Q8N4S0 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC82Q8N4S0 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CCDC82Q8N4S0 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC82Q8N4S0 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC82Q8N4S0 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC82Q8N4S0 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC82Q8N4S0 AC126365.1-201ENST00000578585 1514 ntBASIC17.93■□□□□ 0.46
CCDC82Q8N4S0 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC82Q8N4S0 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC17.92■□□□□ 0.46
CCDC82Q8N4S0 SLC9A7P1-202ENST00000556476 2239 ntBASIC17.92■□□□□ 0.46
CCDC82Q8N4S0 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC82Q8N4S0 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC82Q8N4S0 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC82Q8N4S0 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC17.92■□□□□ 0.46
CCDC82Q8N4S0 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CCDC82Q8N4S0 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CCDC82Q8N4S0 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC82Q8N4S0 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC82Q8N4S0 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC17.92■□□□□ 0.46
CCDC82Q8N4S0 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC82Q8N4S0 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC82Q8N4S0 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC82Q8N4S0 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC82Q8N4S0 AL442647.2-201ENST00000429864 857 ntBASIC17.92■□□□□ 0.46
CCDC82Q8N4S0 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC17.92■□□□□ 0.46
CCDC82Q8N4S0 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC17.92■□□□□ 0.46
CCDC82Q8N4S0 GLI4-203ENST00000517468 963 ntTSL 5 BASIC17.92■□□□□ 0.46
CCDC82Q8N4S0 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC17.92■□□□□ 0.46
CCDC82Q8N4S0 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC17.92■□□□□ 0.46
CCDC82Q8N4S0 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC17.92■□□□□ 0.46
CCDC82Q8N4S0 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC82Q8N4S0 AL596325.1-201ENST00000563991 1082 ntBASIC17.92■□□□□ 0.46
CCDC82Q8N4S0 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC17.92■□□□□ 0.46
CCDC82Q8N4S0 AC027307.3-201ENST00000594262 1100 ntBASIC17.92■□□□□ 0.46
CCDC82Q8N4S0 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC17.92■□□□□ 0.46
CCDC82Q8N4S0 SRP9-204ENST00000619790 377 ntTSL 2 BASIC17.92■□□□□ 0.46
CCDC82Q8N4S0 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CCDC82Q8N4S0 AL033527.5-201ENST00000641382 801 ntBASIC17.92■□□□□ 0.46
CCDC82Q8N4S0 AC105233.6-201ENST00000642093 218 ntBASIC17.92■□□□□ 0.46
CCDC82Q8N4S0 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC17.92■□□□□ 0.46
CCDC82Q8N4S0 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
CCDC82Q8N4S0 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC17.92■□□□□ 0.46
CCDC82Q8N4S0 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC82Q8N4S0 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC82Q8N4S0 AL138799.1-201ENST00000448213 1675 ntBASIC17.92■□□□□ 0.46
CCDC82Q8N4S0 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC82Q8N4S0 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC82Q8N4S0 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC82Q8N4S0 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC82Q8N4S0 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CCDC82Q8N4S0 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC82Q8N4S0 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC82Q8N4S0 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC82Q8N4S0 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CCDC82Q8N4S0 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC82Q8N4S0 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC82Q8N4S0 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC17.91■□□□□ 0.46
CCDC82Q8N4S0 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC82Q8N4S0 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC17.91■□□□□ 0.46
CCDC82Q8N4S0 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC82Q8N4S0 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC82Q8N4S0 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC17.91■□□□□ 0.46
CCDC82Q8N4S0 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC82Q8N4S0 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
CCDC82Q8N4S0 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms