Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CCDC116Q8IYX3 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC116Q8IYX3 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC116Q8IYX3 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC116Q8IYX3 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC116Q8IYX3 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC116Q8IYX3 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC116Q8IYX3 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC116Q8IYX3 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
CCDC116Q8IYX3 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC116Q8IYX3 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC116Q8IYX3 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CCDC116Q8IYX3 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC116Q8IYX3 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC116Q8IYX3 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC116Q8IYX3 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC116Q8IYX3 SPDYE19P-201ENST00000338590 713 ntBASIC14.55□□□□□ -0.08
CCDC116Q8IYX3 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.55□□□□□ -0.08
CCDC116Q8IYX3 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC14.55□□□□□ -0.08
CCDC116Q8IYX3 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
CCDC116Q8IYX3 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC116Q8IYX3 UGT1A2P-201ENST00000454886 866 ntBASIC14.55□□□□□ -0.08
CCDC116Q8IYX3 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC116Q8IYX3 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC116Q8IYX3 NAA50-208ENST00000497255 789 ntTSL 5 BASIC14.55□□□□□ -0.08
CCDC116Q8IYX3 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC14.55□□□□□ -0.08
CCDC116Q8IYX3 TPRX2P-201ENST00000535362 881 ntBASIC14.55□□□□□ -0.08
CCDC116Q8IYX3 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC14.55□□□□□ -0.08
CCDC116Q8IYX3 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC14.55□□□□□ -0.08
CCDC116Q8IYX3 AC023310.3-201ENST00000557027 670 ntBASIC14.55□□□□□ -0.08
CCDC116Q8IYX3 AC100756.1-201ENST00000562736 682 ntBASIC14.55□□□□□ -0.08
CCDC116Q8IYX3 AC138749.3-201ENST00000567691 622 ntBASIC14.55□□□□□ -0.08
CCDC116Q8IYX3 INO80C-206ENST00000586489 594 ntTSL 3 BASIC14.55□□□□□ -0.08
CCDC116Q8IYX3 GPX4-206ENST00000588919 803 ntTSL 2 BASIC14.55□□□□□ -0.08
CCDC116Q8IYX3 AC116165.1-201ENST00000611806 668 ntBASIC14.55□□□□□ -0.08
CCDC116Q8IYX3 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC116Q8IYX3 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC116Q8IYX3 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.55□□□□□ -0.08
CCDC116Q8IYX3 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
CCDC116Q8IYX3 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC116Q8IYX3 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC116Q8IYX3 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC116Q8IYX3 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
CCDC116Q8IYX3 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC116Q8IYX3 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
CCDC116Q8IYX3 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC116Q8IYX3 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CCDC116Q8IYX3 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC116Q8IYX3 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC116Q8IYX3 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
CCDC116Q8IYX3 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.55□□□□□ -0.08
CCDC116Q8IYX3 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC116Q8IYX3 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC116Q8IYX3 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC116Q8IYX3 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC116Q8IYX3 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
CCDC116Q8IYX3 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC116Q8IYX3 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
CCDC116Q8IYX3 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC116Q8IYX3 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC116Q8IYX3 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC116Q8IYX3 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.54□□□□□ -0.08
CCDC116Q8IYX3 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
CCDC116Q8IYX3 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC116Q8IYX3 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC116Q8IYX3 SYS1-203ENST00000414310 795 ntTSL 3 BASIC14.54□□□□□ -0.08
CCDC116Q8IYX3 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC14.54□□□□□ -0.08
CCDC116Q8IYX3 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC14.54□□□□□ -0.08
CCDC116Q8IYX3 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC14.54□□□□□ -0.08
CCDC116Q8IYX3 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
CCDC116Q8IYX3 AL391069.4-201ENST00000609583 481 ntBASIC14.54□□□□□ -0.08
CCDC116Q8IYX3 MROH4P-201ENST00000431302 1578 ntBASIC14.54□□□□□ -0.08
CCDC116Q8IYX3 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC116Q8IYX3 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
CCDC116Q8IYX3 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC116Q8IYX3 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.54□□□□□ -0.08
CCDC116Q8IYX3 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC116Q8IYX3 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.54□□□□□ -0.08
CCDC116Q8IYX3 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.54□□□□□ -0.08
CCDC116Q8IYX3 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC116Q8IYX3 LINC00528-201ENST00000600723 2160 ntBASIC14.54□□□□□ -0.08
CCDC116Q8IYX3 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC14.54□□□□□ -0.08
CCDC116Q8IYX3 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC116Q8IYX3 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC116Q8IYX3 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC116Q8IYX3 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.54□□□□□ -0.08
CCDC116Q8IYX3 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC116Q8IYX3 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC116Q8IYX3 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
CCDC116Q8IYX3 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC116Q8IYX3 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC116Q8IYX3 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC116Q8IYX3 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC116Q8IYX3 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.53□□□□□ -0.08
CCDC116Q8IYX3 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.53□□□□□ -0.08
CCDC116Q8IYX3 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CCDC116Q8IYX3 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC116Q8IYX3 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.53□□□□□ -0.08
CCDC116Q8IYX3 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC116Q8IYX3 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms