Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC14.15□□□□□ -0.14
C9orf40Q8IXQ3 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.15□□□□□ -0.14
C9orf40Q8IXQ3 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
C9orf40Q8IXQ3 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
C9orf40Q8IXQ3 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
C9orf40Q8IXQ3 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
C9orf40Q8IXQ3 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
C9orf40Q8IXQ3 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.14□□□□□ -0.15
C9orf40Q8IXQ3 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
C9orf40Q8IXQ3 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC14.14□□□□□ -0.15
C9orf40Q8IXQ3 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
C9orf40Q8IXQ3 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
C9orf40Q8IXQ3 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
C9orf40Q8IXQ3 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
C9orf40Q8IXQ3 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
C9orf40Q8IXQ3 PES1-204ENST00000402284 2144 ntTSL 5 BASIC14.14□□□□□ -0.15
C9orf40Q8IXQ3 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
C9orf40Q8IXQ3 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.14□□□□□ -0.15
C9orf40Q8IXQ3 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
C9orf40Q8IXQ3 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
C9orf40Q8IXQ3 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
C9orf40Q8IXQ3 WASH3P-207ENST00000560956 1394 ntBASIC14.14□□□□□ -0.15
C9orf40Q8IXQ3 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
C9orf40Q8IXQ3 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
C9orf40Q8IXQ3 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
C9orf40Q8IXQ3 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
C9orf40Q8IXQ3 RPS15-201ENST00000233609 534 ntTSL 2 BASIC14.14□□□□□ -0.15
C9orf40Q8IXQ3 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
C9orf40Q8IXQ3 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
C9orf40Q8IXQ3 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
C9orf40Q8IXQ3 AC092933.1-201ENST00000393644 945 ntBASIC14.14□□□□□ -0.15
C9orf40Q8IXQ3 AC079776.1-201ENST00000401540 1152 ntBASIC14.14□□□□□ -0.15
C9orf40Q8IXQ3 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
C9orf40Q8IXQ3 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC14.14□□□□□ -0.15
C9orf40Q8IXQ3 AC112492.5-201ENST00000421897 457 ntBASIC14.14□□□□□ -0.15
C9orf40Q8IXQ3 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC14.14□□□□□ -0.15
C9orf40Q8IXQ3 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC14.14□□□□□ -0.15
C9orf40Q8IXQ3 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC14.14□□□□□ -0.15
C9orf40Q8IXQ3 CROCCP4-201ENST00000457096 498 ntBASIC14.14□□□□□ -0.15
C9orf40Q8IXQ3 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
C9orf40Q8IXQ3 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC14.14□□□□□ -0.15
C9orf40Q8IXQ3 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC14.14□□□□□ -0.15
C9orf40Q8IXQ3 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC14.14□□□□□ -0.15
C9orf40Q8IXQ3 GNRHR2-203ENST00000581100 1187 ntBASIC14.14□□□□□ -0.15
C9orf40Q8IXQ3 RPS15-205ENST00000586686 562 ntTSL 5 BASIC14.14□□□□□ -0.15
C9orf40Q8IXQ3 RPS15-208ENST00000591804 711 ntTSL 5 BASIC14.14□□□□□ -0.15
C9orf40Q8IXQ3 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
C9orf40Q8IXQ3 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC14.14□□□□□ -0.15
C9orf40Q8IXQ3 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC14.14□□□□□ -0.15
C9orf40Q8IXQ3 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
C9orf40Q8IXQ3 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
C9orf40Q8IXQ3 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
C9orf40Q8IXQ3 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
C9orf40Q8IXQ3 REXO1L2P-201ENST00000425429 2069 ntBASIC14.14□□□□□ -0.15
C9orf40Q8IXQ3 AC023157.3-201ENST00000619086 2088 ntBASIC14.14□□□□□ -0.15
C9orf40Q8IXQ3 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
C9orf40Q8IXQ3 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
C9orf40Q8IXQ3 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.14□□□□□ -0.15
C9orf40Q8IXQ3 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
C9orf40Q8IXQ3 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC14.14□□□□□ -0.15
C9orf40Q8IXQ3 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
C9orf40Q8IXQ3 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
C9orf40Q8IXQ3 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.14□□□□□ -0.15
C9orf40Q8IXQ3 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
C9orf40Q8IXQ3 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
C9orf40Q8IXQ3 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
C9orf40Q8IXQ3 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
C9orf40Q8IXQ3 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
C9orf40Q8IXQ3 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
C9orf40Q8IXQ3 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.14□□□□□ -0.15
C9orf40Q8IXQ3 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
C9orf40Q8IXQ3 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
C9orf40Q8IXQ3 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
C9orf40Q8IXQ3 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
C9orf40Q8IXQ3 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
C9orf40Q8IXQ3 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
C9orf40Q8IXQ3 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
C9orf40Q8IXQ3 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
C9orf40Q8IXQ3 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
C9orf40Q8IXQ3 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
C9orf40Q8IXQ3 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
C9orf40Q8IXQ3 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
C9orf40Q8IXQ3 B9D1-203ENST00000395615 805 ntTSL 3 BASIC14.13□□□□□ -0.15
C9orf40Q8IXQ3 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
C9orf40Q8IXQ3 HIST1H2BPS3-201ENST00000419683 341 ntBASIC14.13□□□□□ -0.15
C9orf40Q8IXQ3 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC14.13□□□□□ -0.15
C9orf40Q8IXQ3 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
C9orf40Q8IXQ3 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC14.13□□□□□ -0.15
C9orf40Q8IXQ3 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC14.13□□□□□ -0.15
C9orf40Q8IXQ3 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC14.13□□□□□ -0.15
C9orf40Q8IXQ3 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC14.13□□□□□ -0.15
C9orf40Q8IXQ3 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
C9orf40Q8IXQ3 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
C9orf40Q8IXQ3 AC145423.3-201ENST00000615987 467 ntBASIC14.13□□□□□ -0.15
C9orf40Q8IXQ3 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC14.13□□□□□ -0.15
C9orf40Q8IXQ3 LRRC59-203ENST00000576448 1531 ntBASIC14.13□□□□□ -0.15
C9orf40Q8IXQ3 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
C9orf40Q8IXQ3 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC14.13□□□□□ -0.15
C9orf40Q8IXQ3 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.13□□□□□ -0.15
C9orf40Q8IXQ3 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms