Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF135Q8IUD6 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF135Q8IUD6 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.34■□□□□ 0.21
RNF135Q8IUD6 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.34■□□□□ 0.21
RNF135Q8IUD6 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF135Q8IUD6 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
RNF135Q8IUD6 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.34■□□□□ 0.21
RNF135Q8IUD6 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF135Q8IUD6 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF135Q8IUD6 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF135Q8IUD6 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF135Q8IUD6 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF135Q8IUD6 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.34■□□□□ 0.21
RNF135Q8IUD6 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF135Q8IUD6 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.34■□□□□ 0.21
RNF135Q8IUD6 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.34■□□□□ 0.21
RNF135Q8IUD6 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.34■□□□□ 0.21
RNF135Q8IUD6 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.34■□□□□ 0.21
RNF135Q8IUD6 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF135Q8IUD6 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RNF135Q8IUD6 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RNF135Q8IUD6 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
RNF135Q8IUD6 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF135Q8IUD6 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RNF135Q8IUD6 BRF1-202ENST00000379932 884 ntTSL 5 BASIC16.34■□□□□ 0.21
RNF135Q8IUD6 MIR33B-201ENST00000385104 96 ntBASIC16.34■□□□□ 0.21
RNF135Q8IUD6 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC16.34■□□□□ 0.21
RNF135Q8IUD6 TOMM22P5-201ENST00000416399 439 ntBASIC16.34■□□□□ 0.21
RNF135Q8IUD6 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF135Q8IUD6 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
RNF135Q8IUD6 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC16.34■□□□□ 0.21
RNF135Q8IUD6 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF135Q8IUD6 TARDBPP1-201ENST00000442013 1203 ntBASIC16.34■□□□□ 0.21
RNF135Q8IUD6 IMP3P2-201ENST00000489760 475 ntBASIC16.34■□□□□ 0.21
RNF135Q8IUD6 AC022137.2-201ENST00000503482 481 ntBASIC16.34■□□□□ 0.21
RNF135Q8IUD6 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC16.34■□□□□ 0.21
RNF135Q8IUD6 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC16.34■□□□□ 0.21
RNF135Q8IUD6 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC16.34■□□□□ 0.21
RNF135Q8IUD6 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC16.34■□□□□ 0.21
RNF135Q8IUD6 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC16.34■□□□□ 0.21
RNF135Q8IUD6 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC16.34■□□□□ 0.21
RNF135Q8IUD6 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC16.34■□□□□ 0.21
RNF135Q8IUD6 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.34■□□□□ 0.21
RNF135Q8IUD6 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF135Q8IUD6 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
RNF135Q8IUD6 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF135Q8IUD6 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.34■□□□□ 0.21
RNF135Q8IUD6 GRN-214ENST00000589265 1632 ntTSL 5 BASIC16.34■□□□□ 0.21
RNF135Q8IUD6 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
RNF135Q8IUD6 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RNF135Q8IUD6 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RNF135Q8IUD6 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
RNF135Q8IUD6 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
RNF135Q8IUD6 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
RNF135Q8IUD6 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RNF135Q8IUD6 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.33■□□□□ 0.21
RNF135Q8IUD6 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.33■□□□□ 0.21
RNF135Q8IUD6 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
RNF135Q8IUD6 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
RNF135Q8IUD6 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RNF135Q8IUD6 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
RNF135Q8IUD6 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.33■□□□□ 0.2
RNF135Q8IUD6 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF135Q8IUD6 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
RNF135Q8IUD6 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC16.33■□□□□ 0.2
RNF135Q8IUD6 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
RNF135Q8IUD6 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
RNF135Q8IUD6 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC16.33■□□□□ 0.2
RNF135Q8IUD6 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC16.33■□□□□ 0.2
RNF135Q8IUD6 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC16.33■□□□□ 0.2
RNF135Q8IUD6 HOMER2P2-201ENST00000451621 847 ntBASIC16.33■□□□□ 0.2
RNF135Q8IUD6 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC16.33■□□□□ 0.2
RNF135Q8IUD6 RPSAP36-202ENST00000494591 1261 ntBASIC16.33■□□□□ 0.2
RNF135Q8IUD6 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RNF135Q8IUD6 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RNF135Q8IUD6 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC16.33■□□□□ 0.2
RNF135Q8IUD6 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC16.33■□□□□ 0.2
RNF135Q8IUD6 AC078819.1-201ENST00000547454 765 ntBASIC16.33■□□□□ 0.2
RNF135Q8IUD6 AC012085.1-201ENST00000548270 765 ntBASIC16.33■□□□□ 0.2
RNF135Q8IUD6 HNRNPUP1-201ENST00000554987 333 ntBASIC16.33■□□□□ 0.2
RNF135Q8IUD6 EEF1DP1-201ENST00000585891 896 ntBASIC16.33■□□□□ 0.2
RNF135Q8IUD6 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC16.33■□□□□ 0.2
RNF135Q8IUD6 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC16.33■□□□□ 0.2
RNF135Q8IUD6 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC16.33■□□□□ 0.2
RNF135Q8IUD6 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
RNF135Q8IUD6 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC16.33■□□□□ 0.2
RNF135Q8IUD6 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF135Q8IUD6 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF135Q8IUD6 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RNF135Q8IUD6 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF135Q8IUD6 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RNF135Q8IUD6 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RNF135Q8IUD6 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
RNF135Q8IUD6 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
RNF135Q8IUD6 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RNF135Q8IUD6 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF135Q8IUD6 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF135Q8IUD6 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RNF135Q8IUD6 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
RNF135Q8IUD6 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms