Protein–RNA interactions for Protein: Q5TCZ1

SH3PXD2A, SH3 and PX domain-containing protein 2A, humanhuman

Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3PXD2AQ5TCZ1 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SH3PXD2AQ5TCZ1 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SH3PXD2AQ5TCZ1 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SH3PXD2AQ5TCZ1 AC011270.2-201ENST00000624293 2550 ntBASIC16.11■□□□□ 0.17
SH3PXD2AQ5TCZ1 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SH3PXD2AQ5TCZ1 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
SH3PXD2AQ5TCZ1 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.11■□□□□ 0.17
SH3PXD2AQ5TCZ1 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SH3PXD2AQ5TCZ1 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SH3PXD2AQ5TCZ1 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
SH3PXD2AQ5TCZ1 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SH3PXD2AQ5TCZ1 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC16.11■□□□□ 0.17
SH3PXD2AQ5TCZ1 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC16.11■□□□□ 0.17
SH3PXD2AQ5TCZ1 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SH3PXD2AQ5TCZ1 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC16.11■□□□□ 0.17
SH3PXD2AQ5TCZ1 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC16.11■□□□□ 0.17
SH3PXD2AQ5TCZ1 GHSR-202ENST00000427970 912 ntBASIC16.11■□□□□ 0.17
SH3PXD2AQ5TCZ1 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SH3PXD2AQ5TCZ1 VDAC1P7-201ENST00000462417 847 ntBASIC16.11■□□□□ 0.17
SH3PXD2AQ5TCZ1 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC16.11■□□□□ 0.17
SH3PXD2AQ5TCZ1 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC16.11■□□□□ 0.17
SH3PXD2AQ5TCZ1 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SH3PXD2AQ5TCZ1 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC16.11■□□□□ 0.17
SH3PXD2AQ5TCZ1 AL049840.4-201ENST00000602422 811 ntBASIC16.11■□□□□ 0.17
SH3PXD2AQ5TCZ1 AC244517.3-201ENST00000616254 1235 ntBASIC16.11■□□□□ 0.17
SH3PXD2AQ5TCZ1 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC16.11■□□□□ 0.17
SH3PXD2AQ5TCZ1 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC16.11■□□□□ 0.17
SH3PXD2AQ5TCZ1 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.11■□□□□ 0.17
SH3PXD2AQ5TCZ1 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SH3PXD2AQ5TCZ1 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SH3PXD2AQ5TCZ1 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC16.11■□□□□ 0.17
SH3PXD2AQ5TCZ1 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SH3PXD2AQ5TCZ1 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SH3PXD2AQ5TCZ1 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SH3PXD2AQ5TCZ1 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SH3PXD2AQ5TCZ1 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SH3PXD2AQ5TCZ1 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SH3PXD2AQ5TCZ1 REXO1L4P-201ENST00000605109 1937 ntBASIC16.11■□□□□ 0.17
SH3PXD2AQ5TCZ1 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
SH3PXD2AQ5TCZ1 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SH3PXD2AQ5TCZ1 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC16.11■□□□□ 0.17
SH3PXD2AQ5TCZ1 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SH3PXD2AQ5TCZ1 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.11■□□□□ 0.17
SH3PXD2AQ5TCZ1 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SH3PXD2AQ5TCZ1 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
SH3PXD2AQ5TCZ1 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SH3PXD2AQ5TCZ1 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
SH3PXD2AQ5TCZ1 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SH3PXD2AQ5TCZ1 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SH3PXD2AQ5TCZ1 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SH3PXD2AQ5TCZ1 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SH3PXD2AQ5TCZ1 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SH3PXD2AQ5TCZ1 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SH3PXD2AQ5TCZ1 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SH3PXD2AQ5TCZ1 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SH3PXD2AQ5TCZ1 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SH3PXD2AQ5TCZ1 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SH3PXD2AQ5TCZ1 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC16.1■□□□□ 0.17
SH3PXD2AQ5TCZ1 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC16.1■□□□□ 0.17
SH3PXD2AQ5TCZ1 AC119751.2-201ENST00000504529 210 ntBASIC16.1■□□□□ 0.17
SH3PXD2AQ5TCZ1 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC16.1■□□□□ 0.17
SH3PXD2AQ5TCZ1 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC16.1■□□□□ 0.17
SH3PXD2AQ5TCZ1 AC055876.2-201ENST00000531834 546 ntBASIC16.1■□□□□ 0.17
SH3PXD2AQ5TCZ1 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SH3PXD2AQ5TCZ1 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SH3PXD2AQ5TCZ1 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC16.1■□□□□ 0.17
SH3PXD2AQ5TCZ1 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC16.1■□□□□ 0.17
SH3PXD2AQ5TCZ1 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SH3PXD2AQ5TCZ1 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC16.1■□□□□ 0.17
SH3PXD2AQ5TCZ1 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC16.1■□□□□ 0.17
SH3PXD2AQ5TCZ1 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
SH3PXD2AQ5TCZ1 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC16.1■□□□□ 0.17
SH3PXD2AQ5TCZ1 PFAS-212ENST00000625942 396 ntTSL 5 BASIC16.1■□□□□ 0.17
SH3PXD2AQ5TCZ1 AC068587.10-201ENST00000641210 219 ntBASIC16.1■□□□□ 0.17
SH3PXD2AQ5TCZ1 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
SH3PXD2AQ5TCZ1 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
SH3PXD2AQ5TCZ1 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SH3PXD2AQ5TCZ1 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SH3PXD2AQ5TCZ1 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.1■□□□□ 0.17
SH3PXD2AQ5TCZ1 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SH3PXD2AQ5TCZ1 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SH3PXD2AQ5TCZ1 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SH3PXD2AQ5TCZ1 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC16.1■□□□□ 0.17
SH3PXD2AQ5TCZ1 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SH3PXD2AQ5TCZ1 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
SH3PXD2AQ5TCZ1 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC16.1■□□□□ 0.17
SH3PXD2AQ5TCZ1 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SH3PXD2AQ5TCZ1 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SH3PXD2AQ5TCZ1 CICP24-201ENST00000605464 2705 ntBASIC16.1■□□□□ 0.17
SH3PXD2AQ5TCZ1 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC16.1■□□□□ 0.17
SH3PXD2AQ5TCZ1 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC16.1■□□□□ 0.17
SH3PXD2AQ5TCZ1 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SH3PXD2AQ5TCZ1 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SH3PXD2AQ5TCZ1 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC16.09■□□□□ 0.17
SH3PXD2AQ5TCZ1 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC16.09■□□□□ 0.17
SH3PXD2AQ5TCZ1 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC16.09■□□□□ 0.17
SH3PXD2AQ5TCZ1 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SH3PXD2AQ5TCZ1 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SH3PXD2AQ5TCZ1 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SH3PXD2AQ5TCZ1 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms