Protein–RNA interactions for Protein: Q2M329

CCDC96, Coiled-coil domain-containing protein 96, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC96Q2M329 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CCDC96Q2M329 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC96Q2M329 SLC9A7P1-201ENST00000554295 3311 ntBASIC17.92■□□□□ 0.46
CCDC96Q2M329 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC96Q2M329 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC17.91■□□□□ 0.46
CCDC96Q2M329 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC17.91■□□□□ 0.46
CCDC96Q2M329 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC96Q2M329 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
CCDC96Q2M329 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
CCDC96Q2M329 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC96Q2M329 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC96Q2M329 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC96Q2M329 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC96Q2M329 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC96Q2M329 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC17.91■□□□□ 0.46
CCDC96Q2M329 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC17.91■□□□□ 0.46
CCDC96Q2M329 PGGT1BP2-201ENST00000398621 1028 ntBASIC17.91■□□□□ 0.46
CCDC96Q2M329 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC96Q2M329 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC17.91■□□□□ 0.46
CCDC96Q2M329 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC17.91■□□□□ 0.46
CCDC96Q2M329 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC17.91■□□□□ 0.46
CCDC96Q2M329 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC17.91■□□□□ 0.46
CCDC96Q2M329 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC17.91■□□□□ 0.46
CCDC96Q2M329 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC17.91■□□□□ 0.46
CCDC96Q2M329 AC244669.2-201ENST00000612320 853 ntBASIC17.91■□□□□ 0.46
CCDC96Q2M329 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC96Q2M329 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC96Q2M329 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
CCDC96Q2M329 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC17.91■□□□□ 0.46
CCDC96Q2M329 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC96Q2M329 KRT8P35-201ENST00000483942 1338 ntBASIC17.91■□□□□ 0.46
CCDC96Q2M329 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC96Q2M329 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC96Q2M329 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC96Q2M329 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC96Q2M329 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC96Q2M329 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
CCDC96Q2M329 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
CCDC96Q2M329 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC96Q2M329 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC17.9■□□□□ 0.46
CCDC96Q2M329 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC17.9■□□□□ 0.46
CCDC96Q2M329 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC96Q2M329 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC17.9■□□□□ 0.46
CCDC96Q2M329 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC96Q2M329 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC96Q2M329 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC17.9■□□□□ 0.46
CCDC96Q2M329 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC17.9■□□□□ 0.46
CCDC96Q2M329 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC96Q2M329 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC96Q2M329 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
CCDC96Q2M329 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC96Q2M329 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC96Q2M329 ZBTB12BP-201ENST00000314232 1122 ntBASIC17.9■□□□□ 0.46
CCDC96Q2M329 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
CCDC96Q2M329 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CCDC96Q2M329 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CCDC96Q2M329 C2orf27AP3-201ENST00000434123 579 ntBASIC17.9■□□□□ 0.46
CCDC96Q2M329 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC17.9■□□□□ 0.46
CCDC96Q2M329 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC17.9■□□□□ 0.46
CCDC96Q2M329 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC17.9■□□□□ 0.46
CCDC96Q2M329 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC17.9■□□□□ 0.46
CCDC96Q2M329 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CCDC96Q2M329 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC17.9■□□□□ 0.46
CCDC96Q2M329 Six3os1_5.1-201ENST00000611000 271 ntBASIC17.9■□□□□ 0.46
CCDC96Q2M329 AL354718.3-201ENST00000616414 581 ntBASIC17.9■□□□□ 0.46
CCDC96Q2M329 CR382287.1-201ENST00000623954 586 ntBASIC17.9■□□□□ 0.46
CCDC96Q2M329 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC96Q2M329 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC17.9■□□□□ 0.46
CCDC96Q2M329 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC96Q2M329 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC96Q2M329 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC96Q2M329 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC17.9■□□□□ 0.46
CCDC96Q2M329 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC96Q2M329 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC96Q2M329 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC96Q2M329 AC090616.6-203ENST00000579186 1945 ntBASIC17.9■□□□□ 0.46
CCDC96Q2M329 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CCDC96Q2M329 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC96Q2M329 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CCDC96Q2M329 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC96Q2M329 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
CCDC96Q2M329 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC96Q2M329 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
CCDC96Q2M329 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC17.89■□□□□ 0.45
CCDC96Q2M329 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC96Q2M329 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC96Q2M329 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CCDC96Q2M329 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CCDC96Q2M329 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC96Q2M329 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC17.89■□□□□ 0.45
CCDC96Q2M329 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC96Q2M329 RPL5P21-201ENST00000404620 815 ntBASIC17.89■□□□□ 0.45
CCDC96Q2M329 KLF2P2-201ENST00000416807 1039 ntBASIC17.89■□□□□ 0.45
CCDC96Q2M329 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC17.89■□□□□ 0.45
CCDC96Q2M329 AC016694.1-201ENST00000434179 700 ntBASIC17.89■□□□□ 0.45
CCDC96Q2M329 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC96Q2M329 RPS2P32-201ENST00000439199 892 ntBASIC17.89■□□□□ 0.45
CCDC96Q2M329 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC17.89■□□□□ 0.45
CCDC96Q2M329 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CCDC96Q2M329 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms