Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SRP54P61011 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SRP54P61011 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC15.21■□□□□ 0.02
SRP54P61011 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.02
SRP54P61011 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SRP54P61011 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.02
SRP54P61011 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SRP54P61011 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.21■□□□□ 0.02
SRP54P61011 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SRP54P61011 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SRP54P61011 AC099063.4-201ENST00000641099 1602 ntBASIC15.21■□□□□ 0.02
SRP54P61011 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
SRP54P61011 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
SRP54P61011 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SRP54P61011 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.2■□□□□ 0.02
SRP54P61011 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SRP54P61011 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
SRP54P61011 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
SRP54P61011 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.2■□□□□ 0.02
SRP54P61011 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC15.2■□□□□ 0.02
SRP54P61011 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SRP54P61011 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC15.2■□□□□ 0.02
SRP54P61011 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SRP54P61011 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SRP54P61011 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SRP54P61011 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SRP54P61011 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SRP54P61011 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
SRP54P61011 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SRP54P61011 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC15.2■□□□□ 0.02
SRP54P61011 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC15.2■□□□□ 0.02
SRP54P61011 HLA-V-201ENST00000429037 534 ntBASIC15.2■□□□□ 0.02
SRP54P61011 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
SRP54P61011 C2orf27AP3-201ENST00000434123 579 ntBASIC15.2■□□□□ 0.02
SRP54P61011 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC15.2■□□□□ 0.02
SRP54P61011 PFN2-205ENST00000461868 613 ntTSL 2 BASIC15.2■□□□□ 0.02
SRP54P61011 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC15.2■□□□□ 0.02
SRP54P61011 MFF-223ENST00000524634 647 ntTSL 2 BASIC15.2■□□□□ 0.02
SRP54P61011 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC15.2■□□□□ 0.02
SRP54P61011 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC15.2■□□□□ 0.02
SRP54P61011 AP000812.2-201ENST00000538934 718 ntBASIC15.2■□□□□ 0.02
SRP54P61011 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC15.2■□□□□ 0.02
SRP54P61011 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC15.2■□□□□ 0.02
SRP54P61011 AL354718.3-201ENST00000616414 581 ntBASIC15.2■□□□□ 0.02
SRP54P61011 CR382287.1-201ENST00000623954 586 ntBASIC15.2■□□□□ 0.02
SRP54P61011 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
SRP54P61011 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
SRP54P61011 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SRP54P61011 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15.2■□□□□ 0.02
SRP54P61011 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SRP54P61011 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
SRP54P61011 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SRP54P61011 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC15.2■□□□□ 0.02
SRP54P61011 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SRP54P61011 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
SRP54P61011 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SRP54P61011 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
SRP54P61011 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
SRP54P61011 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
SRP54P61011 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SRP54P61011 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SRP54P61011 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SRP54P61011 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SRP54P61011 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SRP54P61011 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.19■□□□□ 0.02
SRP54P61011 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
SRP54P61011 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SRP54P61011 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
SRP54P61011 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
SRP54P61011 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SRP54P61011 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
SRP54P61011 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC15.19■□□□□ 0.02
SRP54P61011 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SRP54P61011 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SRP54P61011 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SRP54P61011 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SRP54P61011 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SRP54P61011 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SRP54P61011 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC15.19■□□□□ 0.02
SRP54P61011 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SRP54P61011 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SRP54P61011 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SRP54P61011 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
SRP54P61011 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SRP54P61011 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC15.19■□□□□ 0.02
SRP54P61011 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC15.19■□□□□ 0.02
SRP54P61011 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SRP54P61011 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC15.19■□□□□ 0.02
SRP54P61011 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SRP54P61011 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SRP54P61011 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC15.19■□□□□ 0.02
SRP54P61011 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC15.19■□□□□ 0.02
SRP54P61011 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC15.19■□□□□ 0.02
SRP54P61011 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC15.19■□□□□ 0.02
SRP54P61011 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC15.19■□□□□ 0.02
SRP54P61011 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC15.19■□□□□ 0.02
SRP54P61011 AC244669.2-201ENST00000612320 853 ntBASIC15.19■□□□□ 0.02
SRP54P61011 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC15.19■□□□□ 0.02
SRP54P61011 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SRP54P61011 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms