Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RIPK4P57078 MIR6775-201ENST00000617557 69 ntBASIC20.06■□□□□ 0.8
RIPK4P57078 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC20.06■□□□□ 0.8
RIPK4P57078 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC20.06■□□□□ 0.8
RIPK4P57078 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RIPK4P57078 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RIPK4P57078 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RIPK4P57078 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC20.06■□□□□ 0.8
RIPK4P57078 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RIPK4P57078 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
RIPK4P57078 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
RIPK4P57078 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RIPK4P57078 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RIPK4P57078 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RIPK4P57078 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RIPK4P57078 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RIPK4P57078 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RIPK4P57078 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RIPK4P57078 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
RIPK4P57078 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
RIPK4P57078 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RIPK4P57078 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
RIPK4P57078 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
RIPK4P57078 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
RIPK4P57078 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
RIPK4P57078 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
RIPK4P57078 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
RIPK4P57078 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
RIPK4P57078 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RIPK4P57078 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RIPK4P57078 AC234783.1-201ENST00000441761 496 ntBASIC20.05■□□□□ 0.8
RIPK4P57078 AC022210.1-201ENST00000449856 793 ntBASIC20.05■□□□□ 0.8
RIPK4P57078 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC20.05■□□□□ 0.8
RIPK4P57078 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC20.05■□□□□ 0.8
RIPK4P57078 APRT-204ENST00000563655 709 ntTSL 5 BASIC20.05■□□□□ 0.8
RIPK4P57078 IFT20-216ENST00000588477 774 ntTSL 5 BASIC20.05■□□□□ 0.8
RIPK4P57078 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC20.05■□□□□ 0.8
RIPK4P57078 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC20.05■□□□□ 0.8
RIPK4P57078 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC20.05■□□□□ 0.8
RIPK4P57078 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RIPK4P57078 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
RIPK4P57078 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RIPK4P57078 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RIPK4P57078 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
RIPK4P57078 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC20.05■□□□□ 0.8
RIPK4P57078 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
RIPK4P57078 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RIPK4P57078 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC20.04■□□□□ 0.8
RIPK4P57078 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC20.04■□□□□ 0.8
RIPK4P57078 AC126177.1-201ENST00000547829 2218 ntBASIC20.04■□□□□ 0.8
RIPK4P57078 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
RIPK4P57078 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC20.04■□□□□ 0.8
RIPK4P57078 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RIPK4P57078 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RIPK4P57078 AC006486.2-201ENST00000624246 2199 ntBASIC20.04■□□□□ 0.8
RIPK4P57078 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
RIPK4P57078 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RIPK4P57078 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RIPK4P57078 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RIPK4P57078 PES1-204ENST00000402284 2144 ntTSL 5 BASIC20.04■□□□□ 0.8
RIPK4P57078 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RIPK4P57078 AC016694.1-201ENST00000434179 700 ntBASIC20.04■□□□□ 0.8
RIPK4P57078 EIF3FP3-201ENST00000434851 1086 ntBASIC20.04■□□□□ 0.8
RIPK4P57078 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RIPK4P57078 ATP5G2P4-201ENST00000442175 420 ntBASIC20.04■□□□□ 0.8
RIPK4P57078 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
RIPK4P57078 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
RIPK4P57078 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RIPK4P57078 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC20.04■□□□□ 0.8
RIPK4P57078 AC025279.2-201ENST00000569730 653 ntBASIC20.04■□□□□ 0.8
RIPK4P57078 MIR4259-201ENST00000584466 101 ntBASIC20.04■□□□□ 0.8
RIPK4P57078 AC017083.2-201ENST00000608069 979 ntBASIC20.04■□□□□ 0.8
RIPK4P57078 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
RIPK4P57078 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC20.04■□□□□ 0.8
RIPK4P57078 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RIPK4P57078 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RIPK4P57078 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RIPK4P57078 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RIPK4P57078 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
RIPK4P57078 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
RIPK4P57078 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RIPK4P57078 REXO1L2P-201ENST00000425429 2069 ntBASIC20.04■□□□□ 0.8
RIPK4P57078 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RIPK4P57078 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC20.03■□□□□ 0.8
RIPK4P57078 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RIPK4P57078 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RIPK4P57078 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
RIPK4P57078 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC20.03■□□□□ 0.8
RIPK4P57078 LRRC59-203ENST00000576448 1531 ntBASIC20.03■□□□□ 0.8
RIPK4P57078 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RIPK4P57078 AC023824.1-201ENST00000562945 2975 ntBASIC20.03■□□□□ 0.8
RIPK4P57078 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC20.03■□□□□ 0.8
RIPK4P57078 ZEB1-AS1-208ENST00000607166 2503 ntBASIC20.03■□□□□ 0.8
RIPK4P57078 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RIPK4P57078 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RIPK4P57078 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RIPK4P57078 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RIPK4P57078 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RIPK4P57078 ZBTB12BP-201ENST00000314232 1122 ntBASIC20.03■□□□□ 0.8
RIPK4P57078 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms