Protein–RNA interactions for Protein: P55211

CASP9, Caspase-9, humanhuman

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP9P55211 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CASP9P55211 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.61□□□□□ -0.07
CASP9P55211 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
CASP9P55211 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CASP9P55211 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
CASP9P55211 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CASP9P55211 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CASP9P55211 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
CASP9P55211 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CASP9P55211 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CASP9P55211 AC013726.1-201ENST00000563747 2285 ntBASIC14.61□□□□□ -0.07
CASP9P55211 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CASP9P55211 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.61□□□□□ -0.07
CASP9P55211 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CASP9P55211 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.61□□□□□ -0.07
CASP9P55211 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CASP9P55211 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CASP9P55211 METTL21AP1-201ENST00000438852 635 ntBASIC14.61□□□□□ -0.07
CASP9P55211 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC14.61□□□□□ -0.07
CASP9P55211 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC14.61□□□□□ -0.07
CASP9P55211 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
CASP9P55211 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CASP9P55211 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.61□□□□□ -0.07
CASP9P55211 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CASP9P55211 AC069262.1-201ENST00000539058 672 ntBASIC14.61□□□□□ -0.07
CASP9P55211 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC14.61□□□□□ -0.07
CASP9P55211 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CASP9P55211 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CASP9P55211 LINC01115-203ENST00000606068 577 ntBASIC14.61□□□□□ -0.07
CASP9P55211 SPDYE12P-201ENST00000618416 771 ntBASIC14.61□□□□□ -0.07
CASP9P55211 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC14.61□□□□□ -0.07
CASP9P55211 AL033527.5-202ENST00000641632 1098 ntBASIC14.61□□□□□ -0.07
CASP9P55211 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.61□□□□□ -0.07
CASP9P55211 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC14.61□□□□□ -0.07
CASP9P55211 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CASP9P55211 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CASP9P55211 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CASP9P55211 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CASP9P55211 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CASP9P55211 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
CASP9P55211 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CASP9P55211 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CASP9P55211 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CASP9P55211 AC026748.1-201ENST00000624349 3251 ntBASIC14.61□□□□□ -0.07
CASP9P55211 NIN-202ENST00000324330 4364 ntTSL 5 BASIC14.61□□□□□ -0.07
CASP9P55211 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CASP9P55211 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC14.61□□□□□ -0.07
CASP9P55211 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CASP9P55211 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CASP9P55211 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CASP9P55211 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CASP9P55211 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CASP9P55211 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CASP9P55211 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.61□□□□□ -0.07
CASP9P55211 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CASP9P55211 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CASP9P55211 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CASP9P55211 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.6□□□□□ -0.07
CASP9P55211 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CASP9P55211 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CASP9P55211 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
CASP9P55211 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.6□□□□□ -0.07
CASP9P55211 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CASP9P55211 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
CASP9P55211 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
CASP9P55211 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CASP9P55211 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CASP9P55211 USP40-206ENST00000443711 628 ntTSL 2 BASIC14.6□□□□□ -0.07
CASP9P55211 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CASP9P55211 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC14.6□□□□□ -0.07
CASP9P55211 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC14.6□□□□□ -0.07
CASP9P55211 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC14.6□□□□□ -0.07
CASP9P55211 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC14.6□□□□□ -0.07
CASP9P55211 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CASP9P55211 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC14.6□□□□□ -0.07
CASP9P55211 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC14.6□□□□□ -0.07
CASP9P55211 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
CASP9P55211 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14.6□□□□□ -0.07
CASP9P55211 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CASP9P55211 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
CASP9P55211 MIR6069-201ENST00000620069 79 ntBASIC14.6□□□□□ -0.07
CASP9P55211 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CASP9P55211 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CASP9P55211 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CASP9P55211 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CASP9P55211 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CASP9P55211 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC14.6□□□□□ -0.07
CASP9P55211 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
CASP9P55211 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
CASP9P55211 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
CASP9P55211 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CASP9P55211 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.6□□□□□ -0.07
CASP9P55211 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CASP9P55211 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC14.6□□□□□ -0.07
CASP9P55211 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
CASP9P55211 ZBED1P1-201ENST00000502364 1930 ntBASIC14.6□□□□□ -0.07
CASP9P55211 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CASP9P55211 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC14.6□□□□□ -0.07
CASP9P55211 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
CASP9P55211 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms