Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HMGCS2P54868 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HMGCS2P54868 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC17.56■□□□□ 0.4
HMGCS2P54868 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC17.56■□□□□ 0.4
HMGCS2P54868 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HMGCS2P54868 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.56■□□□□ 0.4
HMGCS2P54868 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HMGCS2P54868 INE2-201ENST00000630399 1874 ntBASIC17.56■□□□□ 0.4
HMGCS2P54868 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HMGCS2P54868 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HMGCS2P54868 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
HMGCS2P54868 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HMGCS2P54868 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HMGCS2P54868 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC17.56■□□□□ 0.4
HMGCS2P54868 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC17.56■□□□□ 0.4
HMGCS2P54868 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
HMGCS2P54868 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
HMGCS2P54868 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HMGCS2P54868 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
HMGCS2P54868 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HMGCS2P54868 AC004899.1-201ENST00000424687 1714 ntBASIC17.55■□□□□ 0.4
HMGCS2P54868 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HMGCS2P54868 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
HMGCS2P54868 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HMGCS2P54868 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC17.55■□□□□ 0.4
HMGCS2P54868 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
HMGCS2P54868 AL359258.3-201ENST00000622910 2331 ntBASIC17.55■□□□□ 0.4
HMGCS2P54868 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.55■□□□□ 0.4
HMGCS2P54868 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC17.55■□□□□ 0.4
HMGCS2P54868 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HMGCS2P54868 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HMGCS2P54868 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.55■□□□□ 0.4
HMGCS2P54868 SLC9A7P1-202ENST00000556476 2239 ntBASIC17.55■□□□□ 0.4
HMGCS2P54868 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC17.55■□□□□ 0.4
HMGCS2P54868 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HMGCS2P54868 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HMGCS2P54868 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HMGCS2P54868 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HMGCS2P54868 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.55■□□□□ 0.4
HMGCS2P54868 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC17.55■□□□□ 0.4
HMGCS2P54868 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
HMGCS2P54868 PES1-204ENST00000402284 2144 ntTSL 5 BASIC17.55■□□□□ 0.4
HMGCS2P54868 RN7SKP175-201ENST00000408472 289 ntBASIC17.55■□□□□ 0.4
HMGCS2P54868 FXNP2-201ENST00000411625 547 ntBASIC17.55■□□□□ 0.4
HMGCS2P54868 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HMGCS2P54868 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC17.55■□□□□ 0.4
HMGCS2P54868 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC17.55■□□□□ 0.4
HMGCS2P54868 AC011742.3-201ENST00000439053 820 ntBASIC17.55■□□□□ 0.4
HMGCS2P54868 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HMGCS2P54868 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC17.55■□□□□ 0.4
HMGCS2P54868 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC17.55■□□□□ 0.4
HMGCS2P54868 RN7SL574P-201ENST00000581512 297 ntBASIC17.55■□□□□ 0.4
HMGCS2P54868 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC17.55■□□□□ 0.4
HMGCS2P54868 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC17.55■□□□□ 0.4
HMGCS2P54868 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
HMGCS2P54868 AC004923.1-202ENST00000642106 209 ntBASIC17.55■□□□□ 0.4
HMGCS2P54868 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HMGCS2P54868 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HMGCS2P54868 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HMGCS2P54868 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HMGCS2P54868 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
HMGCS2P54868 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HMGCS2P54868 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
HMGCS2P54868 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
HMGCS2P54868 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC17.55■□□□□ 0.4
HMGCS2P54868 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
HMGCS2P54868 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HMGCS2P54868 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HMGCS2P54868 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HMGCS2P54868 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HMGCS2P54868 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
HMGCS2P54868 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
HMGCS2P54868 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
HMGCS2P54868 AC009093.2-202ENST00000620513 2079 ntBASIC17.54■□□□□ 0.4
HMGCS2P54868 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HMGCS2P54868 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC17.54■□□□□ 0.4
HMGCS2P54868 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HMGCS2P54868 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.54■□□□□ 0.4
HMGCS2P54868 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
HMGCS2P54868 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
HMGCS2P54868 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HMGCS2P54868 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HMGCS2P54868 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC17.54■□□□□ 0.4
HMGCS2P54868 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HMGCS2P54868 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HMGCS2P54868 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HMGCS2P54868 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HMGCS2P54868 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC17.54■□□□□ 0.4
HMGCS2P54868 NPPA-201ENST00000376476 728 ntTSL 3 BASIC17.54■□□□□ 0.4
HMGCS2P54868 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC17.54■□□□□ 0.4
HMGCS2P54868 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC17.54■□□□□ 0.4
HMGCS2P54868 MSRA-203ENST00000441698 788 ntTSL 2 BASIC17.54■□□□□ 0.4
HMGCS2P54868 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HMGCS2P54868 AC024681.1-201ENST00000521917 487 ntBASIC17.54■□□□□ 0.4
HMGCS2P54868 AC134698.3-201ENST00000523880 214 ntBASIC17.54■□□□□ 0.4
HMGCS2P54868 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HMGCS2P54868 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
HMGCS2P54868 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC17.54■□□□□ 0.4
HMGCS2P54868 MIR4706-201ENST00000582134 82 ntBASIC17.54■□□□□ 0.4
HMGCS2P54868 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms