Protein–RNA interactions for Protein: P52798

EFNA4, Ephrin-A4, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA4P52798 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC12.85□□□□□ -0.35
EFNA4P52798 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
EFNA4P52798 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
EFNA4P52798 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC12.85□□□□□ -0.35
EFNA4P52798 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
EFNA4P52798 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
EFNA4P52798 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC12.85□□□□□ -0.35
EFNA4P52798 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
EFNA4P52798 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC12.85□□□□□ -0.35
EFNA4P52798 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
EFNA4P52798 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
EFNA4P52798 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
EFNA4P52798 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC12.85□□□□□ -0.35
EFNA4P52798 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC12.85□□□□□ -0.35
EFNA4P52798 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC12.85□□□□□ -0.35
EFNA4P52798 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
EFNA4P52798 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
EFNA4P52798 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
EFNA4P52798 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
EFNA4P52798 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
EFNA4P52798 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
EFNA4P52798 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
EFNA4P52798 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
EFNA4P52798 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
EFNA4P52798 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
EFNA4P52798 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
EFNA4P52798 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
EFNA4P52798 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
EFNA4P52798 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC12.84□□□□□ -0.35
EFNA4P52798 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC12.84□□□□□ -0.35
EFNA4P52798 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC12.84□□□□□ -0.35
EFNA4P52798 NDUFAB1P1-201ENST00000404262 460 ntBASIC12.84□□□□□ -0.35
EFNA4P52798 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC12.84□□□□□ -0.35
EFNA4P52798 EIF3FP3-201ENST00000434851 1086 ntBASIC12.84□□□□□ -0.35
EFNA4P52798 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC12.84□□□□□ -0.35
EFNA4P52798 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC12.84□□□□□ -0.35
EFNA4P52798 AC244157.2-201ENST00000616239 1006 ntBASIC12.84□□□□□ -0.35
EFNA4P52798 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
EFNA4P52798 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC12.84□□□□□ -0.35
EFNA4P52798 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
EFNA4P52798 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
EFNA4P52798 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
EFNA4P52798 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC12.84□□□□□ -0.35
EFNA4P52798 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
EFNA4P52798 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC12.84□□□□□ -0.35
EFNA4P52798 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
EFNA4P52798 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
EFNA4P52798 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
EFNA4P52798 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
EFNA4P52798 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC12.84□□□□□ -0.35
EFNA4P52798 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
EFNA4P52798 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC12.84□□□□□ -0.35
EFNA4P52798 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
EFNA4P52798 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
EFNA4P52798 AC092127.1-201ENST00000567093 3455 ntBASIC12.83□□□□□ -0.35
EFNA4P52798 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC12.83□□□□□ -0.35
EFNA4P52798 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
EFNA4P52798 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
EFNA4P52798 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
EFNA4P52798 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
EFNA4P52798 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC12.83□□□□□ -0.36
EFNA4P52798 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
EFNA4P52798 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC12.83□□□□□ -0.36
EFNA4P52798 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
EFNA4P52798 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
EFNA4P52798 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
EFNA4P52798 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
EFNA4P52798 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC12.83□□□□□ -0.36
EFNA4P52798 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC12.83□□□□□ -0.36
EFNA4P52798 HARS-202ENST00000415192 1401 ntTSL 2 BASIC12.83□□□□□ -0.36
EFNA4P52798 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
EFNA4P52798 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
EFNA4P52798 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
EFNA4P52798 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
EFNA4P52798 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC12.83□□□□□ -0.36
EFNA4P52798 KRTAP10-13P-201ENST00000412914 571 ntBASIC12.83□□□□□ -0.36
EFNA4P52798 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC12.83□□□□□ -0.36
EFNA4P52798 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC12.83□□□□□ -0.36
EFNA4P52798 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC12.83□□□□□ -0.36
EFNA4P52798 PTPA-218ENST00000435132 618 ntTSL 2 BASIC12.83□□□□□ -0.36
EFNA4P52798 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC12.83□□□□□ -0.36
EFNA4P52798 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC12.83□□□□□ -0.36
EFNA4P52798 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
EFNA4P52798 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC12.83□□□□□ -0.36
EFNA4P52798 ZNF767P-206ENST00000513792 565 ntBASIC12.83□□□□□ -0.36
EFNA4P52798 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
EFNA4P52798 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC12.83□□□□□ -0.36
EFNA4P52798 RN7SL713P-201ENST00000582127 302 ntBASIC12.83□□□□□ -0.36
EFNA4P52798 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC12.83□□□□□ -0.36
EFNA4P52798 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
EFNA4P52798 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
EFNA4P52798 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
EFNA4P52798 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
EFNA4P52798 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
EFNA4P52798 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
EFNA4P52798 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
EFNA4P52798 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
EFNA4P52798 AC010491.1-201ENST00000563101 2797 ntBASIC12.83□□□□□ -0.36
EFNA4P52798 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
EFNA4P52798 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms