Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
SMARCA4P51532 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC26.64■■□□□ 1.85
SMARCA4P51532 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
SMARCA4P51532 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC26.64■■□□□ 1.85
SMARCA4P51532 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC26.64■■□□□ 1.85
SMARCA4P51532 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC26.64■■□□□ 1.85
SMARCA4P51532 AL592076.1-201ENST00000424448 303 ntBASIC26.64■■□□□ 1.85
SMARCA4P51532 AC003686.1-201ENST00000550956 1034 ntBASIC26.64■■□□□ 1.85
SMARCA4P51532 AP001184.1-201ENST00000637936 376 ntBASIC26.64■■□□□ 1.85
SMARCA4P51532 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC26.64■■□□□ 1.85
SMARCA4P51532 SALL4P5-201ENST00000419001 1760 ntBASIC26.64■■□□□ 1.85
SMARCA4P51532 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
SMARCA4P51532 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
SMARCA4P51532 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC26.63■■□□□ 1.85
SMARCA4P51532 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC26.63■■□□□ 1.85
SMARCA4P51532 MARK2P16-201ENST00000605714 1723 ntBASIC26.63■■□□□ 1.85
SMARCA4P51532 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC26.63■■□□□ 1.85
SMARCA4P51532 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
SMARCA4P51532 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC26.63■■□□□ 1.85
SMARCA4P51532 AC004837.1-201ENST00000446267 564 ntBASIC26.63■■□□□ 1.85
SMARCA4P51532 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC26.63■■□□□ 1.85
SMARCA4P51532 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC26.63■■□□□ 1.85
SMARCA4P51532 AL118516.1-201ENST00000564152 670 ntBASIC26.63■■□□□ 1.85
SMARCA4P51532 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
SMARCA4P51532 FO393412.1-201ENST00000619841 382 ntBASIC26.63■■□□□ 1.85
SMARCA4P51532 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC26.63■■□□□ 1.85
SMARCA4P51532 AC090616.6-203ENST00000579186 1945 ntBASIC26.63■■□□□ 1.85
SMARCA4P51532 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC26.63■■□□□ 1.85
SMARCA4P51532 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC26.63■■□□□ 1.85
SMARCA4P51532 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC26.63■■□□□ 1.85
SMARCA4P51532 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC26.63■■□□□ 1.85
SMARCA4P51532 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
SMARCA4P51532 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC26.63■■□□□ 1.85
SMARCA4P51532 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC26.63■■□□□ 1.85
SMARCA4P51532 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC26.62■■□□□ 1.85
SMARCA4P51532 NKILA-202ENST00000614771 2598 ntBASIC26.62■■□□□ 1.85
SMARCA4P51532 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC26.62■■□□□ 1.85
SMARCA4P51532 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
SMARCA4P51532 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
SMARCA4P51532 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC26.62■■□□□ 1.85
SMARCA4P51532 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC26.62■■□□□ 1.85
SMARCA4P51532 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC26.62■■□□□ 1.85
SMARCA4P51532 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC26.62■■□□□ 1.85
SMARCA4P51532 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC26.62■■□□□ 1.85
SMARCA4P51532 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC26.62■■□□□ 1.85
SMARCA4P51532 C2orf69P1-201ENST00000563532 1093 ntBASIC26.62■■□□□ 1.85
SMARCA4P51532 MT3-203ENST00000565838 421 ntTSL 3 BASIC26.62■■□□□ 1.85
SMARCA4P51532 AC244250.3-201ENST00000620749 366 ntBASIC26.62■■□□□ 1.85
SMARCA4P51532 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
SMARCA4P51532 HLA-DQB1-202ENST00000399079 1501 ntBASIC26.62■■□□□ 1.85
SMARCA4P51532 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC26.62■■□□□ 1.85
SMARCA4P51532 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC26.62■■□□□ 1.85
SMARCA4P51532 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC26.62■■□□□ 1.85
SMARCA4P51532 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC26.62■■□□□ 1.85
SMARCA4P51532 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC26.62■■□□□ 1.85
SMARCA4P51532 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
SMARCA4P51532 PCDHA14-201ENST00000506751 2298 ntBASIC26.62■■□□□ 1.85
SMARCA4P51532 PCDHB19P-201ENST00000570871 2371 ntBASIC26.62■■□□□ 1.85
SMARCA4P51532 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
SMARCA4P51532 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC26.61■■□□□ 1.85
SMARCA4P51532 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
SMARCA4P51532 AL035414.1-201ENST00000451327 857 ntBASIC26.61■■□□□ 1.85
SMARCA4P51532 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC26.61■■□□□ 1.85
SMARCA4P51532 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC26.61■■□□□ 1.85
SMARCA4P51532 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC26.61■■□□□ 1.85
SMARCA4P51532 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC26.61■■□□□ 1.85
SMARCA4P51532 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
SMARCA4P51532 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
SMARCA4P51532 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC26.61■■□□□ 1.85
SMARCA4P51532 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC26.61■■□□□ 1.85
SMARCA4P51532 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC26.61■■□□□ 1.85
SMARCA4P51532 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC26.61■■□□□ 1.85
SMARCA4P51532 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
SMARCA4P51532 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC26.61■■□□□ 1.85
SMARCA4P51532 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
SMARCA4P51532 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC26.61■■□□□ 1.85
SMARCA4P51532 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
SMARCA4P51532 MIR3180-2-201ENST00000581748 88 ntBASIC26.61■■□□□ 1.85
SMARCA4P51532 NAMA-206ENST00000605377 509 ntTSL 5 BASIC26.61■■□□□ 1.85
SMARCA4P51532 AC010491.1-201ENST00000563101 2797 ntBASIC26.6■■□□□ 1.85
SMARCA4P51532 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC26.6■■□□□ 1.85
SMARCA4P51532 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC26.6■■□□□ 1.85
SMARCA4P51532 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC26.6■■□□□ 1.85
SMARCA4P51532 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC26.6■■□□□ 1.85
SMARCA4P51532 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
SMARCA4P51532 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC26.6■■□□□ 1.85
SMARCA4P51532 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
SMARCA4P51532 RN7SL396P-201ENST00000471086 295 ntBASIC26.6■■□□□ 1.85
SMARCA4P51532 CR383656.3-201ENST00000551315 183 ntBASIC26.6■■□□□ 1.85
SMARCA4P51532 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
SMARCA4P51532 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC26.6■■□□□ 1.85
SMARCA4P51532 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC26.6■■□□□ 1.85
SMARCA4P51532 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC26.6■■□□□ 1.85
SMARCA4P51532 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
SMARCA4P51532 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC26.6■■□□□ 1.85
SMARCA4P51532 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC26.59■■□□□ 1.85
SMARCA4P51532 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC26.59■■□□□ 1.85
SMARCA4P51532 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC26.59■■□□□ 1.85
SMARCA4P51532 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC26.59■■□□□ 1.85
SMARCA4P51532 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC26.59■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms