Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
PDE6CP51160 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PDE6CP51160 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC16.67■□□□□ 0.26
PDE6CP51160 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PDE6CP51160 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PDE6CP51160 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PDE6CP51160 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
PDE6CP51160 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PDE6CP51160 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
PDE6CP51160 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PDE6CP51160 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PDE6CP51160 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC16.66■□□□□ 0.26
PDE6CP51160 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC16.66■□□□□ 0.26
PDE6CP51160 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PDE6CP51160 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
PDE6CP51160 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PDE6CP51160 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC16.66■□□□□ 0.26
PDE6CP51160 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PDE6CP51160 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PDE6CP51160 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PDE6CP51160 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
PDE6CP51160 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
PDE6CP51160 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PDE6CP51160 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PDE6CP51160 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PDE6CP51160 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PDE6CP51160 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PDE6CP51160 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PDE6CP51160 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PDE6CP51160 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC16.66■□□□□ 0.26
PDE6CP51160 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PDE6CP51160 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
PDE6CP51160 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
PDE6CP51160 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC16.66■□□□□ 0.26
PDE6CP51160 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
PDE6CP51160 FTH1-202ENST00000526640 786 ntTSL 2 BASIC16.66■□□□□ 0.26
PDE6CP51160 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC16.66■□□□□ 0.26
PDE6CP51160 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC16.66■□□□□ 0.26
PDE6CP51160 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
PDE6CP51160 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC16.66■□□□□ 0.26
PDE6CP51160 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC16.66■□□□□ 0.26
PDE6CP51160 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC16.66■□□□□ 0.26
PDE6CP51160 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC16.66■□□□□ 0.26
PDE6CP51160 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PDE6CP51160 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
PDE6CP51160 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
PDE6CP51160 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
PDE6CP51160 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PDE6CP51160 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PDE6CP51160 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PDE6CP51160 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
PDE6CP51160 AC138969.3-201ENST00000546612 1459 ntBASIC16.66■□□□□ 0.26
PDE6CP51160 AC138932.2-201ENST00000548268 1459 ntBASIC16.66■□□□□ 0.26
PDE6CP51160 AC126755.4-201ENST00000549796 1459 ntBASIC16.66■□□□□ 0.26
PDE6CP51160 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PDE6CP51160 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PDE6CP51160 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC16.66■□□□□ 0.26
PDE6CP51160 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
PDE6CP51160 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PDE6CP51160 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PDE6CP51160 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC16.66■□□□□ 0.26
PDE6CP51160 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PDE6CP51160 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PDE6CP51160 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDE6CP51160 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC16.65■□□□□ 0.26
PDE6CP51160 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PDE6CP51160 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC16.65■□□□□ 0.26
PDE6CP51160 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDE6CP51160 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PDE6CP51160 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDE6CP51160 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
PDE6CP51160 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDE6CP51160 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDE6CP51160 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
PDE6CP51160 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
PDE6CP51160 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDE6CP51160 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
PDE6CP51160 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC16.65■□□□□ 0.26
PDE6CP51160 PTPA-220ENST00000436883 532 ntTSL 4 BASIC16.65■□□□□ 0.26
PDE6CP51160 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
PDE6CP51160 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC16.65■□□□□ 0.26
PDE6CP51160 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC16.65■□□□□ 0.26
PDE6CP51160 RHOA-206ENST00000454011 889 ntTSL 2 BASIC16.65■□□□□ 0.26
PDE6CP51160 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC16.65■□□□□ 0.26
PDE6CP51160 KRT18P43-201ENST00000469825 1281 ntBASIC16.65■□□□□ 0.26
PDE6CP51160 MEIS3P1-201ENST00000495167 958 ntBASIC16.65■□□□□ 0.26
PDE6CP51160 SPDYE18-201ENST00000510091 1050 ntBASIC16.65■□□□□ 0.26
PDE6CP51160 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC16.65■□□□□ 0.26
PDE6CP51160 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC16.65■□□□□ 0.26
PDE6CP51160 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC16.65■□□□□ 0.26
PDE6CP51160 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC16.65■□□□□ 0.26
PDE6CP51160 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
PDE6CP51160 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
PDE6CP51160 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
PDE6CP51160 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PDE6CP51160 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
PDE6CP51160 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC16.65■□□□□ 0.26
PDE6CP51160 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDE6CP51160 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC16.65■□□□□ 0.26
PDE6CP51160 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms