Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
SRP9P49458 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SRP9P49458 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC13.74□□□□□ -0.21
SRP9P49458 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC13.74□□□□□ -0.21
SRP9P49458 INTS4P1-203ENST00000641008 3683 ntBASIC13.74□□□□□ -0.21
SRP9P49458 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SRP9P49458 AL035456.1-201ENST00000456064 1369 ntBASIC13.74□□□□□ -0.21
SRP9P49458 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SRP9P49458 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SRP9P49458 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC13.74□□□□□ -0.21
SRP9P49458 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SRP9P49458 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
SRP9P49458 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SRP9P49458 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SRP9P49458 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
SRP9P49458 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SRP9P49458 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC13.74□□□□□ -0.21
SRP9P49458 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC13.74□□□□□ -0.21
SRP9P49458 AL139010.1-201ENST00000454878 894 ntBASIC13.74□□□□□ -0.21
SRP9P49458 AC092183.1-201ENST00000469884 875 ntBASIC13.74□□□□□ -0.21
SRP9P49458 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC13.74□□□□□ -0.21
SRP9P49458 AC109322.1-201ENST00000524499 1264 ntBASIC13.74□□□□□ -0.21
SRP9P49458 VPS29-207ENST00000549970 818 ntTSL 3 BASIC13.74□□□□□ -0.21
SRP9P49458 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC13.74□□□□□ -0.21
SRP9P49458 AC007967.4-201ENST00000614700 386 ntBASIC13.74□□□□□ -0.21
SRP9P49458 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC13.74□□□□□ -0.21
SRP9P49458 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SRP9P49458 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
SRP9P49458 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC13.74□□□□□ -0.21
SRP9P49458 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SRP9P49458 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
SRP9P49458 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SRP9P49458 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC13.74□□□□□ -0.21
SRP9P49458 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SRP9P49458 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC13.74□□□□□ -0.21
SRP9P49458 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC13.74□□□□□ -0.21
SRP9P49458 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
SRP9P49458 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SRP9P49458 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SRP9P49458 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SRP9P49458 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SRP9P49458 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC13.74□□□□□ -0.21
SRP9P49458 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC13.74□□□□□ -0.21
SRP9P49458 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SRP9P49458 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SRP9P49458 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SRP9P49458 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC13.74□□□□□ -0.21
SRP9P49458 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SRP9P49458 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC13.73□□□□□ -0.21
SRP9P49458 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SRP9P49458 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
SRP9P49458 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SRP9P49458 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SRP9P49458 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
SRP9P49458 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC13.73□□□□□ -0.21
SRP9P49458 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
SRP9P49458 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SRP9P49458 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13.73□□□□□ -0.21
SRP9P49458 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SRP9P49458 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
SRP9P49458 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC13.73□□□□□ -0.21
SRP9P49458 GRAMD4P3-201ENST00000621665 1669 ntBASIC13.73□□□□□ -0.21
SRP9P49458 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SRP9P49458 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
SRP9P49458 AC023024.2-201ENST00000623561 1993 ntBASIC13.73□□□□□ -0.21
SRP9P49458 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SRP9P49458 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC13.73□□□□□ -0.21
SRP9P49458 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
SRP9P49458 AL139400.1-201ENST00000366220 510 ntBASIC13.73□□□□□ -0.21
SRP9P49458 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
SRP9P49458 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
SRP9P49458 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC13.73□□□□□ -0.21
SRP9P49458 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC13.73□□□□□ -0.21
SRP9P49458 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC13.73□□□□□ -0.21
SRP9P49458 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC13.73□□□□□ -0.21
SRP9P49458 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SRP9P49458 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC13.73□□□□□ -0.21
SRP9P49458 NAA38-207ENST00000576861 556 ntTSL 3 BASIC13.73□□□□□ -0.21
SRP9P49458 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SRP9P49458 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SRP9P49458 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SRP9P49458 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
SRP9P49458 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SRP9P49458 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SRP9P49458 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC13.73□□□□□ -0.21
SRP9P49458 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
SRP9P49458 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC13.73□□□□□ -0.21
SRP9P49458 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SRP9P49458 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
SRP9P49458 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SRP9P49458 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
SRP9P49458 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SRP9P49458 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
SRP9P49458 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SRP9P49458 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC13.72□□□□□ -0.21
SRP9P49458 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
SRP9P49458 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SRP9P49458 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SRP9P49458 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
SRP9P49458 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms