Protein–RNA interactions for Protein: P30260

CDC27, Cell division cycle protein 27 homolog, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27P30260 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CDC27P30260 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CDC27P30260 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
CDC27P30260 LILRP1-201ENST00000444199 1370 ntBASIC17.79■□□□□ 0.44
CDC27P30260 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
CDC27P30260 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC17.78■□□□□ 0.44
CDC27P30260 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDC27P30260 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC17.78■□□□□ 0.44
CDC27P30260 GSN-203ENST00000373808 2664 ntTSL 2 BASIC17.78■□□□□ 0.44
CDC27P30260 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDC27P30260 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDC27P30260 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDC27P30260 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC17.78■□□□□ 0.44
CDC27P30260 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDC27P30260 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
CDC27P30260 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDC27P30260 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDC27P30260 AL035633.1-201ENST00000406139 838 ntBASIC17.78■□□□□ 0.44
CDC27P30260 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC17.78■□□□□ 0.44
CDC27P30260 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC17.78■□□□□ 0.44
CDC27P30260 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC17.78■□□□□ 0.44
CDC27P30260 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CDC27P30260 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC17.78■□□□□ 0.44
CDC27P30260 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC17.78■□□□□ 0.44
CDC27P30260 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CDC27P30260 AL596325.1-201ENST00000563991 1082 ntBASIC17.78■□□□□ 0.44
CDC27P30260 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC17.78■□□□□ 0.44
CDC27P30260 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC17.78■□□□□ 0.44
CDC27P30260 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
CDC27P30260 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDC27P30260 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CDC27P30260 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC17.78■□□□□ 0.44
CDC27P30260 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDC27P30260 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDC27P30260 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDC27P30260 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDC27P30260 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CDC27P30260 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDC27P30260 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDC27P30260 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDC27P30260 AL137783.1-201ENST00000623494 1896 ntBASIC17.78■□□□□ 0.44
CDC27P30260 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CDC27P30260 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC17.77■□□□□ 0.44
CDC27P30260 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CDC27P30260 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC17.77■□□□□ 0.44
CDC27P30260 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDC27P30260 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDC27P30260 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC17.77■□□□□ 0.44
CDC27P30260 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
CDC27P30260 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDC27P30260 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC17.77■□□□□ 0.44
CDC27P30260 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDC27P30260 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CDC27P30260 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDC27P30260 AL645937.2-201ENST00000396808 931 ntBASIC17.77■□□□□ 0.44
CDC27P30260 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC17.77■□□□□ 0.44
CDC27P30260 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC17.77■□□□□ 0.44
CDC27P30260 RN7SL692P-201ENST00000464677 288 ntBASIC17.77■□□□□ 0.44
CDC27P30260 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CDC27P30260 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC17.77■□□□□ 0.44
CDC27P30260 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
CDC27P30260 ENPP7P5-201ENST00000541031 1031 ntBASIC17.77■□□□□ 0.44
CDC27P30260 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC17.77■□□□□ 0.44
CDC27P30260 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC17.77■□□□□ 0.44
CDC27P30260 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CDC27P30260 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC17.77■□□□□ 0.44
CDC27P30260 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC17.77■□□□□ 0.44
CDC27P30260 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC17.77■□□□□ 0.44
CDC27P30260 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
CDC27P30260 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDC27P30260 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC17.77■□□□□ 0.44
CDC27P30260 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CDC27P30260 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC17.77■□□□□ 0.43
CDC27P30260 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC17.77■□□□□ 0.43
CDC27P30260 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
CDC27P30260 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
CDC27P30260 CICP23-201ENST00000605013 2741 ntBASIC17.77■□□□□ 0.43
CDC27P30260 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC17.77■□□□□ 0.43
CDC27P30260 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDC27P30260 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC17.76■□□□□ 0.43
CDC27P30260 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CDC27P30260 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDC27P30260 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC17.76■□□□□ 0.43
CDC27P30260 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CDC27P30260 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CDC27P30260 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CDC27P30260 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CDC27P30260 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDC27P30260 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC17.76■□□□□ 0.43
CDC27P30260 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CDC27P30260 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDC27P30260 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CDC27P30260 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC17.76■□□□□ 0.43
CDC27P30260 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC17.76■□□□□ 0.43
CDC27P30260 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDC27P30260 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDC27P30260 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CDC27P30260 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CDC27P30260 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
CDC27P30260 AL139094.1-201ENST00000405549 1188 ntBASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms