Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC14.18□□□□□ -0.14
ABCD3P28288 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
ABCD3P28288 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ABCD3P28288 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
ABCD3P28288 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
ABCD3P28288 AC007787.1-201ENST00000588095 1583 ntBASIC14.17□□□□□ -0.14
ABCD3P28288 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ABCD3P28288 AC093525.8-201ENST00000624099 1342 ntBASIC14.17□□□□□ -0.14
ABCD3P28288 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ABCD3P28288 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
ABCD3P28288 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ABCD3P28288 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
ABCD3P28288 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
ABCD3P28288 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ABCD3P28288 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ABCD3P28288 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ABCD3P28288 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ABCD3P28288 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.17□□□□□ -0.14
ABCD3P28288 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
ABCD3P28288 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC14.17□□□□□ -0.14
ABCD3P28288 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ABCD3P28288 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
ABCD3P28288 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ABCD3P28288 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ABCD3P28288 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ABCD3P28288 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.17□□□□□ -0.14
ABCD3P28288 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ABCD3P28288 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ABCD3P28288 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
ABCD3P28288 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
ABCD3P28288 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC14.17□□□□□ -0.14
ABCD3P28288 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC14.17□□□□□ -0.14
ABCD3P28288 APOA1-205ENST00000375329 927 ntTSL 2 BASIC14.17□□□□□ -0.14
ABCD3P28288 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
ABCD3P28288 GSAP-205ENST00000430584 600 ntTSL 5 BASIC14.17□□□□□ -0.14
ABCD3P28288 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC14.17□□□□□ -0.14
ABCD3P28288 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
ABCD3P28288 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ABCD3P28288 RBM7-207ENST00000544582 692 ntTSL 3 BASIC14.17□□□□□ -0.14
ABCD3P28288 CR383656.12-201ENST00000549567 513 ntBASIC14.17□□□□□ -0.14
ABCD3P28288 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC14.17□□□□□ -0.14
ABCD3P28288 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ABCD3P28288 CLUHP6-201ENST00000580789 941 ntBASIC14.17□□□□□ -0.14
ABCD3P28288 AC010319.3-201ENST00000597028 470 ntBASIC14.17□□□□□ -0.14
ABCD3P28288 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC14.17□□□□□ -0.14
ABCD3P28288 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC14.17□□□□□ -0.14
ABCD3P28288 BX539320.1-201ENST00000623759 877 ntBASIC14.17□□□□□ -0.14
ABCD3P28288 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC14.17□□□□□ -0.14
ABCD3P28288 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
ABCD3P28288 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ABCD3P28288 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
ABCD3P28288 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.17□□□□□ -0.14
ABCD3P28288 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
ABCD3P28288 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ABCD3P28288 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ABCD3P28288 AC063926.3-201ENST00000624734 5658 ntBASIC14.17□□□□□ -0.14
ABCD3P28288 ZBTB45P1-201ENST00000452761 1456 ntBASIC14.17□□□□□ -0.14
ABCD3P28288 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.17□□□□□ -0.14
ABCD3P28288 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC14.17□□□□□ -0.14
ABCD3P28288 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.17□□□□□ -0.14
ABCD3P28288 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.17□□□□□ -0.14
ABCD3P28288 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.17□□□□□ -0.14
ABCD3P28288 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.17□□□□□ -0.14
ABCD3P28288 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ABCD3P28288 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ABCD3P28288 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
ABCD3P28288 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ABCD3P28288 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.16□□□□□ -0.14
ABCD3P28288 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ABCD3P28288 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14.16□□□□□ -0.14
ABCD3P28288 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
ABCD3P28288 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
ABCD3P28288 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC14.16□□□□□ -0.14
ABCD3P28288 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ABCD3P28288 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ABCD3P28288 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
ABCD3P28288 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ABCD3P28288 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ABCD3P28288 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ABCD3P28288 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ABCD3P28288 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC14.16□□□□□ -0.14
ABCD3P28288 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
ABCD3P28288 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
ABCD3P28288 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC14.16□□□□□ -0.14
ABCD3P28288 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
ABCD3P28288 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC14.16□□□□□ -0.14
ABCD3P28288 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC14.16□□□□□ -0.14
ABCD3P28288 GAPDHP21-201ENST00000450301 1010 ntBASIC14.16□□□□□ -0.14
ABCD3P28288 KRT17P7-201ENST00000451704 1104 ntBASIC14.16□□□□□ -0.14
ABCD3P28288 AC007389.4-201ENST00000454674 793 ntBASIC14.16□□□□□ -0.14
ABCD3P28288 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ABCD3P28288 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
ABCD3P28288 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC14.16□□□□□ -0.14
ABCD3P28288 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ABCD3P28288 AP001063.1-201ENST00000568332 529 ntBASIC14.16□□□□□ -0.14
ABCD3P28288 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC14.16□□□□□ -0.14
ABCD3P28288 AC132938.2-201ENST00000579188 680 ntBASIC14.16□□□□□ -0.14
ABCD3P28288 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC14.16□□□□□ -0.14
ABCD3P28288 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC14.16□□□□□ -0.14
ABCD3P28288 IGHV3-72-202ENST00000621503 303 ntBASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms