Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC18.44■□□□□ 0.54
NCLP19338 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NCLP19338 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NCLP19338 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NCLP19338 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC18.44■□□□□ 0.54
NCLP19338 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
NCLP19338 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
NCLP19338 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NCLP19338 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC18.44■□□□□ 0.54
NCLP19338 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
NCLP19338 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC18.44■□□□□ 0.54
NCLP19338 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NCLP19338 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NCLP19338 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
NCLP19338 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
NCLP19338 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
NCLP19338 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
NCLP19338 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NCLP19338 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC18.43■□□□□ 0.54
NCLP19338 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC18.43■□□□□ 0.54
NCLP19338 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC18.43■□□□□ 0.54
NCLP19338 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
NCLP19338 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NCLP19338 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NCLP19338 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC18.43■□□□□ 0.54
NCLP19338 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
NCLP19338 AC002056.1-201ENST00000395613 760 ntBASIC18.43■□□□□ 0.54
NCLP19338 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
NCLP19338 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC18.43■□□□□ 0.54
NCLP19338 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
NCLP19338 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
NCLP19338 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
NCLP19338 AC243562.2-201ENST00000561247 970 ntBASIC18.43■□□□□ 0.54
NCLP19338 AC027796.2-201ENST00000575326 344 ntBASIC18.43■□□□□ 0.54
NCLP19338 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC18.43■□□□□ 0.54
NCLP19338 AL513210.1-201ENST00000629608 234 ntBASIC18.43■□□□□ 0.54
NCLP19338 AC105339.1-204ENST00000636249 355 ntBASIC18.43■□□□□ 0.54
NCLP19338 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
NCLP19338 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NCLP19338 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
NCLP19338 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NCLP19338 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
NCLP19338 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC18.43■□□□□ 0.54
NCLP19338 ZBTB45P2-201ENST00000452245 1531 ntBASIC18.43■□□□□ 0.54
NCLP19338 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC18.43■□□□□ 0.54
NCLP19338 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
NCLP19338 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
NCLP19338 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
NCLP19338 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC18.43■□□□□ 0.54
NCLP19338 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NCLP19338 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC18.43■□□□□ 0.54
NCLP19338 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
NCLP19338 BNIP3P1-202ENST00000550043 1585 ntBASIC18.42■□□□□ 0.54
NCLP19338 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC18.42■□□□□ 0.54
NCLP19338 AC148477.4-201ENST00000613430 1793 ntBASIC18.42■□□□□ 0.54
NCLP19338 FLII-221ENST00000578558 2377 ntTSL 5 BASIC18.42■□□□□ 0.54
NCLP19338 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
NCLP19338 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NCLP19338 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NCLP19338 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
NCLP19338 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NCLP19338 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NCLP19338 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC18.42■□□□□ 0.54
NCLP19338 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
NCLP19338 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NCLP19338 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NCLP19338 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
NCLP19338 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NCLP19338 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC18.42■□□□□ 0.54
NCLP19338 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NCLP19338 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC18.42■□□□□ 0.54
NCLP19338 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NCLP19338 NME2-201ENST00000393183 568 ntTSL 2 BASIC18.42■□□□□ 0.54
NCLP19338 ADH5P3-201ENST00000433842 1137 ntBASIC18.42■□□□□ 0.54
NCLP19338 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC18.42■□□□□ 0.54
NCLP19338 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC18.42■□□□□ 0.54
NCLP19338 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NCLP19338 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC18.42■□□□□ 0.54
NCLP19338 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC18.42■□□□□ 0.54
NCLP19338 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC18.42■□□□□ 0.54
NCLP19338 AL138918.1-201ENST00000568306 659 ntBASIC18.42■□□□□ 0.54
NCLP19338 IGHV3OR16-6-201ENST00000568775 360 ntBASIC18.42■□□□□ 0.54
NCLP19338 AC027612.4-201ENST00000605371 583 ntBASIC18.42■□□□□ 0.54
NCLP19338 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NCLP19338 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC18.42■□□□□ 0.54
NCLP19338 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NCLP19338 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC18.42■□□□□ 0.54
NCLP19338 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NCLP19338 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NCLP19338 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
NCLP19338 AC126365.1-201ENST00000578585 1514 ntBASIC18.42■□□□□ 0.54
NCLP19338 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC18.42■□□□□ 0.54
NCLP19338 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
NCLP19338 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NCLP19338 KRT8P44-201ENST00000441609 1350 ntBASIC18.42■□□□□ 0.54
NCLP19338 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NCLP19338 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC18.41■□□□□ 0.54
NCLP19338 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC18.41■□□□□ 0.54
NCLP19338 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC18.41■□□□□ 0.54
NCLP19338 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms