Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.32■□□□□ 0.36
TPM3P06753 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC17.32■□□□□ 0.36
TPM3P06753 AL138918.1-201ENST00000568306 659 ntBASIC17.32■□□□□ 0.36
TPM3P06753 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.32■□□□□ 0.36
TPM3P06753 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.32■□□□□ 0.36
TPM3P06753 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.32■□□□□ 0.36
TPM3P06753 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC17.32■□□□□ 0.36
TPM3P06753 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TPM3P06753 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.32■□□□□ 0.36
TPM3P06753 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC17.32■□□□□ 0.36
TPM3P06753 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC17.32■□□□□ 0.36
TPM3P06753 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TPM3P06753 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TPM3P06753 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TPM3P06753 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TPM3P06753 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC17.32■□□□□ 0.36
TPM3P06753 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC17.32■□□□□ 0.36
TPM3P06753 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
TPM3P06753 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TPM3P06753 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TPM3P06753 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TPM3P06753 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TPM3P06753 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TPM3P06753 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TPM3P06753 CYP4F24P-201ENST00000586049 1580 ntBASIC17.32■□□□□ 0.36
TPM3P06753 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TPM3P06753 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
TPM3P06753 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
TPM3P06753 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TPM3P06753 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
TPM3P06753 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TPM3P06753 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
TPM3P06753 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
TPM3P06753 AKAP8P1-201ENST00000434743 1349 ntBASIC17.31■□□□□ 0.36
TPM3P06753 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TPM3P06753 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TPM3P06753 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TPM3P06753 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC17.31■□□□□ 0.36
TPM3P06753 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
TPM3P06753 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC17.31■□□□□ 0.36
TPM3P06753 MIR1224-201ENST00000408193 85 ntBASIC17.31■□□□□ 0.36
TPM3P06753 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TPM3P06753 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TPM3P06753 AC074386.1-202ENST00000463561 864 ntBASIC17.31■□□□□ 0.36
TPM3P06753 IGHV3-22-201ENST00000520721 359 ntBASIC17.31■□□□□ 0.36
TPM3P06753 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC17.31■□□□□ 0.36
TPM3P06753 Z83851.2-201ENST00000609564 659 ntBASIC17.31■□□□□ 0.36
TPM3P06753 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TPM3P06753 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TPM3P06753 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC17.31■□□□□ 0.36
TPM3P06753 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TPM3P06753 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC17.31■□□□□ 0.36
TPM3P06753 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC17.31■□□□□ 0.36
TPM3P06753 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TPM3P06753 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
TPM3P06753 MTHFR-210ENST00000641407 2387 ntBASIC17.31■□□□□ 0.36
TPM3P06753 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC17.31■□□□□ 0.36
TPM3P06753 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TPM3P06753 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
TPM3P06753 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC17.31■□□□□ 0.36
TPM3P06753 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC17.31■□□□□ 0.36
TPM3P06753 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC17.31■□□□□ 0.36
TPM3P06753 AC015802.1-201ENST00000588104 1449 ntBASIC17.3■□□□□ 0.36
TPM3P06753 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TPM3P06753 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC17.3■□□□□ 0.36
TPM3P06753 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TPM3P06753 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
TPM3P06753 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
TPM3P06753 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TPM3P06753 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TPM3P06753 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TPM3P06753 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TPM3P06753 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
TPM3P06753 AC004870.1-201ENST00000315132 882 ntBASIC17.3■□□□□ 0.36
TPM3P06753 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TPM3P06753 FAM220BP-201ENST00000377689 816 ntBASIC17.3■□□□□ 0.36
TPM3P06753 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
TPM3P06753 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TPM3P06753 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC17.3■□□□□ 0.36
TPM3P06753 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC17.3■□□□□ 0.36
TPM3P06753 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TPM3P06753 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC17.3■□□□□ 0.36
TPM3P06753 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TPM3P06753 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC17.3■□□□□ 0.36
TPM3P06753 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
TPM3P06753 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.3■□□□□ 0.36
TPM3P06753 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.3■□□□□ 0.36
TPM3P06753 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
TPM3P06753 AC008267.7-201ENST00000624570 1194 ntBASIC17.3■□□□□ 0.36
TPM3P06753 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC17.3■□□□□ 0.36
TPM3P06753 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
TPM3P06753 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TPM3P06753 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TPM3P06753 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TPM3P06753 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC17.3■□□□□ 0.36
TPM3P06753 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC17.3■□□□□ 0.36
TPM3P06753 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TPM3P06753 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC17.3■□□□□ 0.36
TPM3P06753 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
TPM3P06753 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms