Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
HLA-DQA2P01906 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
HLA-DQA2P01906 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC13.9□□□□□ -0.18
HLA-DQA2P01906 AMT-224ENST00000635808 1610 ntTSL 5 BASIC13.9□□□□□ -0.19
HLA-DQA2P01906 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.19
HLA-DQA2P01906 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HLA-DQA2P01906 MARS-233ENST00000628866 2583 ntTSL 5 BASIC13.89□□□□□ -0.19
HLA-DQA2P01906 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
HLA-DQA2P01906 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HLA-DQA2P01906 TNN-203ENST00000622870 3719 ntTSL 5 BASIC13.89□□□□□ -0.19
HLA-DQA2P01906 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
HLA-DQA2P01906 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HLA-DQA2P01906 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC13.89□□□□□ -0.19
HLA-DQA2P01906 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC13.89□□□□□ -0.19
HLA-DQA2P01906 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
HLA-DQA2P01906 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
HLA-DQA2P01906 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
HLA-DQA2P01906 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
HLA-DQA2P01906 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HLA-DQA2P01906 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HLA-DQA2P01906 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
HLA-DQA2P01906 RPL5P21-201ENST00000404620 815 ntBASIC13.89□□□□□ -0.19
HLA-DQA2P01906 SPDYE17-201ENST00000412399 783 ntBASIC13.89□□□□□ -0.19
HLA-DQA2P01906 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC13.89□□□□□ -0.19
HLA-DQA2P01906 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC13.89□□□□□ -0.19
HLA-DQA2P01906 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC13.89□□□□□ -0.19
HLA-DQA2P01906 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HLA-DQA2P01906 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC13.89□□□□□ -0.19
HLA-DQA2P01906 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
HLA-DQA2P01906 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC13.89□□□□□ -0.19
HLA-DQA2P01906 SNHG9-202ENST00000564014 471 ntBASIC13.89□□□□□ -0.19
HLA-DQA2P01906 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC13.89□□□□□ -0.19
HLA-DQA2P01906 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
HLA-DQA2P01906 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
HLA-DQA2P01906 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC13.89□□□□□ -0.19
HLA-DQA2P01906 AL133215.2-201ENST00000609242 977 ntBASIC13.89□□□□□ -0.19
HLA-DQA2P01906 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC13.89□□□□□ -0.19
HLA-DQA2P01906 MIR6069-201ENST00000620069 79 ntBASIC13.89□□□□□ -0.19
HLA-DQA2P01906 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC13.89□□□□□ -0.19
HLA-DQA2P01906 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC13.89□□□□□ -0.19
HLA-DQA2P01906 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
HLA-DQA2P01906 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HLA-DQA2P01906 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
HLA-DQA2P01906 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC13.89□□□□□ -0.19
HLA-DQA2P01906 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HLA-DQA2P01906 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
HLA-DQA2P01906 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HLA-DQA2P01906 CICP11-201ENST00000434745 2827 ntBASIC13.89□□□□□ -0.19
HLA-DQA2P01906 CETN4P-206ENST00000642099 2168 ntBASIC13.89□□□□□ -0.19
HLA-DQA2P01906 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC13.89□□□□□ -0.19
HLA-DQA2P01906 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
HLA-DQA2P01906 CICP24-201ENST00000605464 2705 ntBASIC13.89□□□□□ -0.19
HLA-DQA2P01906 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC13.89□□□□□ -0.19
HLA-DQA2P01906 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC13.89□□□□□ -0.19
HLA-DQA2P01906 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC13.89□□□□□ -0.19
HLA-DQA2P01906 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HLA-DQA2P01906 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HLA-DQA2P01906 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13.89□□□□□ -0.19
HLA-DQA2P01906 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HLA-DQA2P01906 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC13.89□□□□□ -0.19
HLA-DQA2P01906 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HLA-DQA2P01906 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
HLA-DQA2P01906 AC084364.1-201ENST00000551967 1556 ntBASIC13.88□□□□□ -0.19
HLA-DQA2P01906 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HLA-DQA2P01906 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC13.88□□□□□ -0.19
HLA-DQA2P01906 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC13.88□□□□□ -0.19
HLA-DQA2P01906 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
HLA-DQA2P01906 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HLA-DQA2P01906 AL136379.1-201ENST00000623471 2642 ntBASIC13.88□□□□□ -0.19
HLA-DQA2P01906 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC13.88□□□□□ -0.19
HLA-DQA2P01906 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC13.88□□□□□ -0.19
HLA-DQA2P01906 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
HLA-DQA2P01906 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
HLA-DQA2P01906 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HLA-DQA2P01906 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.88□□□□□ -0.19
HLA-DQA2P01906 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
HLA-DQA2P01906 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HLA-DQA2P01906 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HLA-DQA2P01906 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
HLA-DQA2P01906 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HLA-DQA2P01906 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC13.88□□□□□ -0.19
HLA-DQA2P01906 TARDBPP1-201ENST00000442013 1203 ntBASIC13.88□□□□□ -0.19
HLA-DQA2P01906 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
HLA-DQA2P01906 SERBP1P3-201ENST00000459980 809 ntBASIC13.88□□□□□ -0.19
HLA-DQA2P01906 PTK7-212ENST00000476760 902 ntTSL 2 BASIC13.88□□□□□ -0.19
HLA-DQA2P01906 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC13.88□□□□□ -0.19
HLA-DQA2P01906 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC13.88□□□□□ -0.19
HLA-DQA2P01906 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC13.88□□□□□ -0.19
HLA-DQA2P01906 AL079307.3-201ENST00000556114 283 ntBASIC13.88□□□□□ -0.19
HLA-DQA2P01906 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
HLA-DQA2P01906 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC13.88□□□□□ -0.19
HLA-DQA2P01906 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HLA-DQA2P01906 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
HLA-DQA2P01906 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HLA-DQA2P01906 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
HLA-DQA2P01906 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HLA-DQA2P01906 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HLA-DQA2P01906 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
HLA-DQA2P01906 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC13.88□□□□□ -0.19
HLA-DQA2P01906 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms