Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
RTN3O95197 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.25■□□□□ 0.19
RTN3O95197 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC16.25■□□□□ 0.19
RTN3O95197 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RTN3O95197 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RTN3O95197 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
RTN3O95197 AC018665.1-201ENST00000622927 1362 ntBASIC16.25■□□□□ 0.19
RTN3O95197 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.25■□□□□ 0.19
RTN3O95197 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC16.25■□□□□ 0.19
RTN3O95197 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RTN3O95197 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
RTN3O95197 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
RTN3O95197 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
RTN3O95197 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC16.24■□□□□ 0.19
RTN3O95197 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.24■□□□□ 0.19
RTN3O95197 AL359258.3-201ENST00000622910 2331 ntBASIC16.24■□□□□ 0.19
RTN3O95197 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RTN3O95197 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.24■□□□□ 0.19
RTN3O95197 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RTN3O95197 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RTN3O95197 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
RTN3O95197 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RTN3O95197 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RTN3O95197 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RTN3O95197 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
RTN3O95197 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
RTN3O95197 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RTN3O95197 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
RTN3O95197 AC012441.1-201ENST00000446669 685 ntBASIC16.24■□□□□ 0.19
RTN3O95197 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC16.24■□□□□ 0.19
RTN3O95197 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC16.24■□□□□ 0.19
RTN3O95197 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC16.24■□□□□ 0.19
RTN3O95197 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RTN3O95197 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
RTN3O95197 APRT-204ENST00000563655 709 ntTSL 5 BASIC16.24■□□□□ 0.19
RTN3O95197 ORC6-206ENST00000568364 888 ntTSL 5 BASIC16.24■□□□□ 0.19
RTN3O95197 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC16.24■□□□□ 0.19
RTN3O95197 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC16.24■□□□□ 0.19
RTN3O95197 BX539320.1-201ENST00000623759 877 ntBASIC16.24■□□□□ 0.19
RTN3O95197 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC16.24■□□□□ 0.19
RTN3O95197 AL645728.2-202ENST00000641679 227 ntBASIC16.24■□□□□ 0.19
RTN3O95197 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RTN3O95197 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RTN3O95197 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RTN3O95197 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RTN3O95197 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RTN3O95197 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RTN3O95197 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
RTN3O95197 PRAL-201ENST00000624952 3286 ntBASIC16.24■□□□□ 0.19
RTN3O95197 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RTN3O95197 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RTN3O95197 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RTN3O95197 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC16.24■□□□□ 0.19
RTN3O95197 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RTN3O95197 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RTN3O95197 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.24■□□□□ 0.19
RTN3O95197 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
RTN3O95197 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
RTN3O95197 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
RTN3O95197 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RTN3O95197 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RTN3O95197 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RTN3O95197 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RTN3O95197 USE1-206ENST00000595101 1776 ntTSL 2 BASIC16.23■□□□□ 0.19
RTN3O95197 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RTN3O95197 AMT-224ENST00000635808 1610 ntTSL 5 BASIC16.23■□□□□ 0.19
RTN3O95197 AC134312.5-201ENST00000568031 1313 ntBASIC16.23■□□□□ 0.19
RTN3O95197 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
RTN3O95197 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RTN3O95197 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC16.23■□□□□ 0.19
RTN3O95197 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
RTN3O95197 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
RTN3O95197 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RTN3O95197 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
RTN3O95197 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RTN3O95197 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RTN3O95197 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC16.23■□□□□ 0.19
RTN3O95197 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC16.23■□□□□ 0.19
RTN3O95197 AC022137.2-201ENST00000503482 481 ntBASIC16.23■□□□□ 0.19
RTN3O95197 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
RTN3O95197 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC16.23■□□□□ 0.19
RTN3O95197 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC16.23■□□□□ 0.19
RTN3O95197 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RTN3O95197 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC16.23■□□□□ 0.19
RTN3O95197 AL512343.1-201ENST00000605837 169 ntBASIC16.23■□□□□ 0.19
RTN3O95197 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC16.23■□□□□ 0.19
RTN3O95197 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
RTN3O95197 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RTN3O95197 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
RTN3O95197 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
RTN3O95197 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RTN3O95197 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RTN3O95197 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
RTN3O95197 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
RTN3O95197 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RTN3O95197 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RTN3O95197 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
RTN3O95197 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RTN3O95197 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.23■□□□□ 0.19
RTN3O95197 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms