Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCDH17O14917 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCDH17O14917 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
PCDH17O14917 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCDH17O14917 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCDH17O14917 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
PCDH17O14917 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCDH17O14917 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCDH17O14917 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCDH17O14917 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
PCDH17O14917 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PCDH17O14917 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCDH17O14917 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCDH17O14917 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PCDH17O14917 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCDH17O14917 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCDH17O14917 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCDH17O14917 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCDH17O14917 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.74□□□□□ -0.05
PCDH17O14917 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCDH17O14917 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCDH17O14917 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCDH17O14917 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC14.74□□□□□ -0.05
PCDH17O14917 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
PCDH17O14917 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
PCDH17O14917 AL512384.1-201ENST00000406683 331 ntBASIC14.74□□□□□ -0.05
PCDH17O14917 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC14.74□□□□□ -0.05
PCDH17O14917 AC074338.1-201ENST00000416825 156 ntBASIC14.74□□□□□ -0.05
PCDH17O14917 KRT18P43-201ENST00000469825 1281 ntBASIC14.74□□□□□ -0.05
PCDH17O14917 AC092552.1-201ENST00000547243 906 ntBASIC14.74□□□□□ -0.05
PCDH17O14917 POLE2-203ENST00000553805 496 ntTSL 2 BASIC14.74□□□□□ -0.05
PCDH17O14917 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC14.74□□□□□ -0.05
PCDH17O14917 AC097359.3-201ENST00000603982 1210 ntBASIC14.74□□□□□ -0.05
PCDH17O14917 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
PCDH17O14917 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC14.74□□□□□ -0.05
PCDH17O14917 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCDH17O14917 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PCDH17O14917 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PCDH17O14917 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
PCDH17O14917 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PCDH17O14917 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCDH17O14917 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCDH17O14917 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
PCDH17O14917 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCDH17O14917 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
PCDH17O14917 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.74□□□□□ -0.05
PCDH17O14917 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCDH17O14917 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
PCDH17O14917 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.74□□□□□ -0.05
PCDH17O14917 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.74□□□□□ -0.05
PCDH17O14917 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCDH17O14917 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCDH17O14917 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.74□□□□□ -0.05
PCDH17O14917 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PCDH17O14917 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCDH17O14917 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCDH17O14917 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.74□□□□□ -0.05
PCDH17O14917 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
PCDH17O14917 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14.74□□□□□ -0.05
PCDH17O14917 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCDH17O14917 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCDH17O14917 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
PCDH17O14917 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.74□□□□□ -0.05
PCDH17O14917 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.74□□□□□ -0.05
PCDH17O14917 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PCDH17O14917 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PCDH17O14917 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC14.73□□□□□ -0.05
PCDH17O14917 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC14.73□□□□□ -0.05
PCDH17O14917 AL009178.2-201ENST00000597278 2719 ntBASIC14.73□□□□□ -0.05
PCDH17O14917 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PCDH17O14917 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PCDH17O14917 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PCDH17O14917 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
PCDH17O14917 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.73□□□□□ -0.05
PCDH17O14917 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PCDH17O14917 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PCDH17O14917 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.73□□□□□ -0.05
PCDH17O14917 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PCDH17O14917 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PCDH17O14917 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
PCDH17O14917 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
PCDH17O14917 AL133267.1-201ENST00000398220 340 ntBASIC14.73□□□□□ -0.05
PCDH17O14917 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.73□□□□□ -0.05
PCDH17O14917 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.73□□□□□ -0.05
PCDH17O14917 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
PCDH17O14917 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC14.73□□□□□ -0.05
PCDH17O14917 ELK1P1-201ENST00000485699 580 ntBASIC14.73□□□□□ -0.05
PCDH17O14917 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PCDH17O14917 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC14.73□□□□□ -0.05
PCDH17O14917 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC14.73□□□□□ -0.05
PCDH17O14917 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC14.73□□□□□ -0.05
PCDH17O14917 AC106886.1-201ENST00000568660 600 ntBASIC14.73□□□□□ -0.05
PCDH17O14917 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC14.73□□□□□ -0.05
PCDH17O14917 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.73□□□□□ -0.05
PCDH17O14917 AC000095.1-201ENST00000603208 874 ntBASIC14.73□□□□□ -0.05
PCDH17O14917 MIR8072-201ENST00000614241 80 ntBASIC14.73□□□□□ -0.05
PCDH17O14917 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.73□□□□□ -0.05
PCDH17O14917 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PCDH17O14917 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PCDH17O14917 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms