Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC15.52■□□□□ 0.08
PCDHGC4Q9Y5F7 AC104640.1-201ENST00000562617 2109 ntBASIC15.52■□□□□ 0.08
PCDHGC4Q9Y5F7 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHGC4Q9Y5F7 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHGC4Q9Y5F7 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHGC4Q9Y5F7 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHGC4Q9Y5F7 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHGC4Q9Y5F7 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHGC4Q9Y5F7 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.52■□□□□ 0.08
PCDHGC4Q9Y5F7 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.52■□□□□ 0.08
PCDHGC4Q9Y5F7 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHGC4Q9Y5F7 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHGC4Q9Y5F7 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC15.52■□□□□ 0.08
PCDHGC4Q9Y5F7 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHGC4Q9Y5F7 AL512384.1-201ENST00000406683 331 ntBASIC15.52■□□□□ 0.08
PCDHGC4Q9Y5F7 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHGC4Q9Y5F7 GHSR-202ENST00000427970 912 ntBASIC15.52■□□□□ 0.08
PCDHGC4Q9Y5F7 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHGC4Q9Y5F7 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC15.52■□□□□ 0.08
PCDHGC4Q9Y5F7 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC15.52■□□□□ 0.08
PCDHGC4Q9Y5F7 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHGC4Q9Y5F7 NEU3-203ENST00000529024 581 ntTSL 3 BASIC15.52■□□□□ 0.08
PCDHGC4Q9Y5F7 RBM7-207ENST00000544582 692 ntTSL 3 BASIC15.52■□□□□ 0.08
PCDHGC4Q9Y5F7 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC15.52■□□□□ 0.08
PCDHGC4Q9Y5F7 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC15.52■□□□□ 0.08
PCDHGC4Q9Y5F7 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC15.52■□□□□ 0.08
PCDHGC4Q9Y5F7 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC15.52■□□□□ 0.08
PCDHGC4Q9Y5F7 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC15.52■□□□□ 0.08
PCDHGC4Q9Y5F7 IGHV3-72-202ENST00000621503 303 ntBASIC15.52■□□□□ 0.08
PCDHGC4Q9Y5F7 BX539320.1-201ENST00000623759 877 ntBASIC15.52■□□□□ 0.08
PCDHGC4Q9Y5F7 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
PCDHGC4Q9Y5F7 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PCDHGC4Q9Y5F7 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
PCDHGC4Q9Y5F7 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PCDHGC4Q9Y5F7 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PCDHGC4Q9Y5F7 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PCDHGC4Q9Y5F7 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
PCDHGC4Q9Y5F7 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PCDHGC4Q9Y5F7 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PCDHGC4Q9Y5F7 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
PCDHGC4Q9Y5F7 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC15.52■□□□□ 0.07
PCDHGC4Q9Y5F7 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PCDHGC4Q9Y5F7 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PCDHGC4Q9Y5F7 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC15.51■□□□□ 0.07
PCDHGC4Q9Y5F7 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGC4Q9Y5F7 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.51■□□□□ 0.07
PCDHGC4Q9Y5F7 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC15.51■□□□□ 0.07
PCDHGC4Q9Y5F7 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGC4Q9Y5F7 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.51■□□□□ 0.07
PCDHGC4Q9Y5F7 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.51■□□□□ 0.07
PCDHGC4Q9Y5F7 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGC4Q9Y5F7 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGC4Q9Y5F7 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC15.51■□□□□ 0.07
PCDHGC4Q9Y5F7 AC093525.8-201ENST00000624099 1342 ntBASIC15.51■□□□□ 0.07
PCDHGC4Q9Y5F7 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGC4Q9Y5F7 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGC4Q9Y5F7 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.51■□□□□ 0.07
PCDHGC4Q9Y5F7 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC15.51■□□□□ 0.07
PCDHGC4Q9Y5F7 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
PCDHGC4Q9Y5F7 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGC4Q9Y5F7 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGC4Q9Y5F7 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGC4Q9Y5F7 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
PCDHGC4Q9Y5F7 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGC4Q9Y5F7 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGC4Q9Y5F7 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC15.51■□□□□ 0.07
PCDHGC4Q9Y5F7 AC104457.1-201ENST00000401024 814 ntBASIC15.51■□□□□ 0.07
PCDHGC4Q9Y5F7 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC15.51■□□□□ 0.07
PCDHGC4Q9Y5F7 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC15.51■□□□□ 0.07
PCDHGC4Q9Y5F7 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
PCDHGC4Q9Y5F7 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGC4Q9Y5F7 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGC4Q9Y5F7 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC15.51■□□□□ 0.07
PCDHGC4Q9Y5F7 METTL26-214ENST00000614890 801 ntTSL 3 BASIC15.51■□□□□ 0.07
PCDHGC4Q9Y5F7 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC15.51■□□□□ 0.07
PCDHGC4Q9Y5F7 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
PCDHGC4Q9Y5F7 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGC4Q9Y5F7 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGC4Q9Y5F7 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
PCDHGC4Q9Y5F7 ZBTB45P1-201ENST00000452761 1456 ntBASIC15.51■□□□□ 0.07
PCDHGC4Q9Y5F7 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGC4Q9Y5F7 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGC4Q9Y5F7 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC15.51■□□□□ 0.07
PCDHGC4Q9Y5F7 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGC4Q9Y5F7 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGC4Q9Y5F7 SLC9A7P1-202ENST00000556476 2239 ntBASIC15.51■□□□□ 0.07
PCDHGC4Q9Y5F7 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.51■□□□□ 0.07
PCDHGC4Q9Y5F7 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGC4Q9Y5F7 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGC4Q9Y5F7 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGC4Q9Y5F7 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.51■□□□□ 0.07
PCDHGC4Q9Y5F7 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGC4Q9Y5F7 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGC4Q9Y5F7 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGC4Q9Y5F7 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC15.5■□□□□ 0.07
PCDHGC4Q9Y5F7 AL158070.2-201ENST00000623713 1621 ntBASIC15.5■□□□□ 0.07
PCDHGC4Q9Y5F7 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGC4Q9Y5F7 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
PCDHGC4Q9Y5F7 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGC4Q9Y5F7 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms