Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC17.43■□□□□ 0.38
HDAC6Q9UBN7 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC17.43■□□□□ 0.38
HDAC6Q9UBN7 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HDAC6Q9UBN7 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC17.43■□□□□ 0.38
HDAC6Q9UBN7 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HDAC6Q9UBN7 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HDAC6Q9UBN7 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
HDAC6Q9UBN7 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC17.43■□□□□ 0.38
HDAC6Q9UBN7 AC012441.1-201ENST00000446669 685 ntBASIC17.43■□□□□ 0.38
HDAC6Q9UBN7 FO681548.1-201ENST00000455617 1132 ntBASIC17.43■□□□□ 0.38
HDAC6Q9UBN7 KRT18P43-201ENST00000469825 1281 ntBASIC17.43■□□□□ 0.38
HDAC6Q9UBN7 AP000812.2-201ENST00000538934 718 ntBASIC17.43■□□□□ 0.38
HDAC6Q9UBN7 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC17.43■□□□□ 0.38
HDAC6Q9UBN7 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
HDAC6Q9UBN7 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC17.43■□□□□ 0.38
HDAC6Q9UBN7 AP001063.1-201ENST00000568332 529 ntBASIC17.43■□□□□ 0.38
HDAC6Q9UBN7 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC17.43■□□□□ 0.38
HDAC6Q9UBN7 RN7SL219P-201ENST00000582872 296 ntBASIC17.43■□□□□ 0.38
HDAC6Q9UBN7 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
HDAC6Q9UBN7 METTL26-214ENST00000614890 801 ntTSL 3 BASIC17.43■□□□□ 0.38
HDAC6Q9UBN7 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HDAC6Q9UBN7 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC17.43■□□□□ 0.38
HDAC6Q9UBN7 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
HDAC6Q9UBN7 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
HDAC6Q9UBN7 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC17.43■□□□□ 0.38
HDAC6Q9UBN7 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HDAC6Q9UBN7 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HDAC6Q9UBN7 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC17.43■□□□□ 0.38
HDAC6Q9UBN7 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC17.43■□□□□ 0.38
HDAC6Q9UBN7 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HDAC6Q9UBN7 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HDAC6Q9UBN7 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
HDAC6Q9UBN7 AC099063.4-201ENST00000641099 1602 ntBASIC17.43■□□□□ 0.38
HDAC6Q9UBN7 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC17.43■□□□□ 0.38
HDAC6Q9UBN7 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
HDAC6Q9UBN7 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
HDAC6Q9UBN7 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
HDAC6Q9UBN7 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HDAC6Q9UBN7 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HDAC6Q9UBN7 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC17.42■□□□□ 0.38
HDAC6Q9UBN7 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HDAC6Q9UBN7 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC17.42■□□□□ 0.38
HDAC6Q9UBN7 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
HDAC6Q9UBN7 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
HDAC6Q9UBN7 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
HDAC6Q9UBN7 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
HDAC6Q9UBN7 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
HDAC6Q9UBN7 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC17.42■□□□□ 0.38
HDAC6Q9UBN7 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC17.42■□□□□ 0.38
HDAC6Q9UBN7 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC17.42■□□□□ 0.38
HDAC6Q9UBN7 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HDAC6Q9UBN7 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
HDAC6Q9UBN7 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HDAC6Q9UBN7 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC17.42■□□□□ 0.38
HDAC6Q9UBN7 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HDAC6Q9UBN7 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
HDAC6Q9UBN7 AC106760.1-201ENST00000508690 800 ntBASIC17.42■□□□□ 0.38
HDAC6Q9UBN7 RNA5SP412-201ENST00000516234 123 ntBASIC17.42■□□□□ 0.38
HDAC6Q9UBN7 FAM8A2P-201ENST00000528813 1142 ntBASIC17.42■□□□□ 0.38
HDAC6Q9UBN7 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC17.42■□□□□ 0.38
HDAC6Q9UBN7 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC17.42■□□□□ 0.38
HDAC6Q9UBN7 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC17.42■□□□□ 0.38
HDAC6Q9UBN7 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HDAC6Q9UBN7 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC17.42■□□□□ 0.38
HDAC6Q9UBN7 AC244669.2-201ENST00000612320 853 ntBASIC17.42■□□□□ 0.38
HDAC6Q9UBN7 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
HDAC6Q9UBN7 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC17.42■□□□□ 0.38
HDAC6Q9UBN7 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HDAC6Q9UBN7 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
HDAC6Q9UBN7 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HDAC6Q9UBN7 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HDAC6Q9UBN7 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC17.42■□□□□ 0.38
HDAC6Q9UBN7 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HDAC6Q9UBN7 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HDAC6Q9UBN7 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
HDAC6Q9UBN7 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HDAC6Q9UBN7 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HDAC6Q9UBN7 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC17.41■□□□□ 0.38
HDAC6Q9UBN7 LRRFIP1P1-201ENST00000498774 2246 ntBASIC17.41■□□□□ 0.38
HDAC6Q9UBN7 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
HDAC6Q9UBN7 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
HDAC6Q9UBN7 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HDAC6Q9UBN7 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
HDAC6Q9UBN7 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC17.41■□□□□ 0.38
HDAC6Q9UBN7 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
HDAC6Q9UBN7 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC17.41■□□□□ 0.38
HDAC6Q9UBN7 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HDAC6Q9UBN7 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
HDAC6Q9UBN7 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC17.41■□□□□ 0.38
HDAC6Q9UBN7 AC006486.2-201ENST00000624246 2199 ntBASIC17.41■□□□□ 0.38
HDAC6Q9UBN7 MIR648-201ENST00000385046 94 ntBASIC17.41■□□□□ 0.38
HDAC6Q9UBN7 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC17.41■□□□□ 0.38
HDAC6Q9UBN7 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC17.41■□□□□ 0.38
HDAC6Q9UBN7 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HDAC6Q9UBN7 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC17.41■□□□□ 0.38
HDAC6Q9UBN7 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC17.41■□□□□ 0.38
HDAC6Q9UBN7 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC17.41■□□□□ 0.38
HDAC6Q9UBN7 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC17.41■□□□□ 0.38
HDAC6Q9UBN7 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC17.41■□□□□ 0.38
HDAC6Q9UBN7 CMC2-214ENST00000565925 640 ntTSL 5 BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms