Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 AC112693.3-201ENST00000624819 1983 ntBASIC18.41■□□□□ 0.54
RTN4Q9NQC3 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
RTN4Q9NQC3 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
RTN4Q9NQC3 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RTN4Q9NQC3 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC18.4■□□□□ 0.54
RTN4Q9NQC3 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RTN4Q9NQC3 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC18.4■□□□□ 0.54
RTN4Q9NQC3 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RTN4Q9NQC3 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RTN4Q9NQC3 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC18.4■□□□□ 0.54
RTN4Q9NQC3 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RTN4Q9NQC3 GTF2IRD1P1-202ENST00000457166 2426 ntTSL 2 BASIC18.4■□□□□ 0.54
RTN4Q9NQC3 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
RTN4Q9NQC3 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
RTN4Q9NQC3 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RTN4Q9NQC3 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
RTN4Q9NQC3 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RTN4Q9NQC3 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RTN4Q9NQC3 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RTN4Q9NQC3 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RTN4Q9NQC3 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC18.4■□□□□ 0.54
RTN4Q9NQC3 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC18.4■□□□□ 0.54
RTN4Q9NQC3 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC18.4■□□□□ 0.54
RTN4Q9NQC3 AC110921.1-201ENST00000577544 612 ntTSL 3 BASIC18.4■□□□□ 0.54
RTN4Q9NQC3 MIR4492-201ENST00000581627 80 ntBASIC18.4■□□□□ 0.54
RTN4Q9NQC3 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC18.4■□□□□ 0.54
RTN4Q9NQC3 AL591684.3-201ENST00000605187 298 ntBASIC18.4■□□□□ 0.54
RTN4Q9NQC3 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
RTN4Q9NQC3 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RTN4Q9NQC3 BCL10-202ENST00000620248 774 ntTSL 5 BASIC18.4■□□□□ 0.54
RTN4Q9NQC3 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC18.4■□□□□ 0.54
RTN4Q9NQC3 RAB37-202ENST00000392610 2858 ntTSL 3 BASIC18.4■□□□□ 0.54
RTN4Q9NQC3 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC18.4■□□□□ 0.54
RTN4Q9NQC3 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC18.4■□□□□ 0.54
RTN4Q9NQC3 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RTN4Q9NQC3 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RTN4Q9NQC3 OSTM1-AS1-202ENST00000441184 3334 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RTN4Q9NQC3 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
RTN4Q9NQC3 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RTN4Q9NQC3 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
RTN4Q9NQC3 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
RTN4Q9NQC3 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC18.4■□□□□ 0.54
RTN4Q9NQC3 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RTN4Q9NQC3 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
RTN4Q9NQC3 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
RTN4Q9NQC3 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
RTN4Q9NQC3 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RTN4Q9NQC3 AL365181.3-201ENST00000605886 3222 ntBASIC18.4■□□□□ 0.54
RTN4Q9NQC3 FUBP1-202ENST00000370767 2524 ntTSL 5 BASIC18.4■□□□□ 0.54
RTN4Q9NQC3 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC18.39■□□□□ 0.54
RTN4Q9NQC3 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
RTN4Q9NQC3 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC18.39■□□□□ 0.54
RTN4Q9NQC3 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
RTN4Q9NQC3 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
RTN4Q9NQC3 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
RTN4Q9NQC3 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.54
RTN4Q9NQC3 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
RTN4Q9NQC3 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RTN4Q9NQC3 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RTN4Q9NQC3 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RTN4Q9NQC3 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
RTN4Q9NQC3 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
RTN4Q9NQC3 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RTN4Q9NQC3 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RTN4Q9NQC3 TUBGCP5-208ENST00000620435 3342 ntTSL 2 BASIC18.39■□□□□ 0.53
RTN4Q9NQC3 POTEE-201ENST00000356920 4159 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RTN4Q9NQC3 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC18.39■□□□□ 0.53
RTN4Q9NQC3 MRPL55-209ENST00000366735 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RTN4Q9NQC3 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RTN4Q9NQC3 NUS1P2-201ENST00000417358 873 ntBASIC18.39■□□□□ 0.53
RTN4Q9NQC3 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RTN4Q9NQC3 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
RTN4Q9NQC3 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RTN4Q9NQC3 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.39■□□□□ 0.53
RTN4Q9NQC3 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.39■□□□□ 0.53
RTN4Q9NQC3 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC18.39■□□□□ 0.53
RTN4Q9NQC3 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC18.39■□□□□ 0.53
RTN4Q9NQC3 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC18.39■□□□□ 0.53
RTN4Q9NQC3 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RTN4Q9NQC3 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RTN4Q9NQC3 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RTN4Q9NQC3 RNF145-205ENST00000518802 2603 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RTN4Q9NQC3 AL731571.1-201ENST00000617058 5428 ntBASIC18.39■□□□□ 0.53
RTN4Q9NQC3 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
RTN4Q9NQC3 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
RTN4Q9NQC3 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RTN4Q9NQC3 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RTN4Q9NQC3 BDH1-201ENST00000358186 3330 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
RTN4Q9NQC3 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
RTN4Q9NQC3 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC18.39■□□□□ 0.53
RTN4Q9NQC3 NCF1C-201ENST00000438382 1427 ntBASIC18.39■□□□□ 0.53
RTN4Q9NQC3 TKT-201ENST00000296289 1931 ntTSL 5 BASIC18.39■□□□□ 0.53
RTN4Q9NQC3 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
RTN4Q9NQC3 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
RTN4Q9NQC3 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RTN4Q9NQC3 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
RTN4Q9NQC3 DCAF6-201ENST00000312263 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RTN4Q9NQC3 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
RTN4Q9NQC3 DMBT1P1-203ENST00000636837 4628 ntBASIC18.38■□□□□ 0.53
RTN4Q9NQC3 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms