Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
PIF1Q9H611 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
PIF1Q9H611 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PIF1Q9H611 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PIF1Q9H611 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC14.81□□□□□ -0.04
PIF1Q9H611 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PIF1Q9H611 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC14.81□□□□□ -0.04
PIF1Q9H611 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PIF1Q9H611 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
PIF1Q9H611 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PIF1Q9H611 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
PIF1Q9H611 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.81□□□□□ -0.04
PIF1Q9H611 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PIF1Q9H611 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
PIF1Q9H611 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
PIF1Q9H611 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
PIF1Q9H611 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.8□□□□□ -0.04
PIF1Q9H611 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PIF1Q9H611 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PIF1Q9H611 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PIF1Q9H611 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PIF1Q9H611 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PIF1Q9H611 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC14.8□□□□□ -0.04
PIF1Q9H611 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PIF1Q9H611 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PIF1Q9H611 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PIF1Q9H611 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PIF1Q9H611 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
PIF1Q9H611 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PIF1Q9H611 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
PIF1Q9H611 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PIF1Q9H611 CBR1-202ENST00000399191 838 ntTSL 3 BASIC14.8□□□□□ -0.04
PIF1Q9H611 AL355306.1-201ENST00000415580 579 ntBASIC14.8□□□□□ -0.04
PIF1Q9H611 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC14.8□□□□□ -0.04
PIF1Q9H611 AP000347.1-202ENST00000435868 847 ntBASIC14.8□□□□□ -0.04
PIF1Q9H611 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PIF1Q9H611 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
PIF1Q9H611 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
PIF1Q9H611 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PIF1Q9H611 FAM86C2P-203ENST00000528684 1004 ntBASIC14.8□□□□□ -0.04
PIF1Q9H611 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PIF1Q9H611 C20orf181-201ENST00000623918 480 ntBASIC14.8□□□□□ -0.04
PIF1Q9H611 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC14.8□□□□□ -0.04
PIF1Q9H611 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PIF1Q9H611 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PIF1Q9H611 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PIF1Q9H611 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
PIF1Q9H611 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC14.8□□□□□ -0.04
PIF1Q9H611 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
PIF1Q9H611 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PIF1Q9H611 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.8□□□□□ -0.04
PIF1Q9H611 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.8□□□□□ -0.04
PIF1Q9H611 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC14.8□□□□□ -0.04
PIF1Q9H611 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PIF1Q9H611 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PIF1Q9H611 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PIF1Q9H611 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
PIF1Q9H611 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC14.8□□□□□ -0.04
PIF1Q9H611 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
PIF1Q9H611 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.8□□□□□ -0.04
PIF1Q9H611 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PIF1Q9H611 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.8□□□□□ -0.04
PIF1Q9H611 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.8□□□□□ -0.04
PIF1Q9H611 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC14.8□□□□□ -0.04
PIF1Q9H611 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PIF1Q9H611 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PIF1Q9H611 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PIF1Q9H611 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC14.79□□□□□ -0.04
PIF1Q9H611 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PIF1Q9H611 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
PIF1Q9H611 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
PIF1Q9H611 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PIF1Q9H611 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC14.79□□□□□ -0.04
PIF1Q9H611 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PIF1Q9H611 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PIF1Q9H611 FAM220BP-201ENST00000377689 816 ntBASIC14.79□□□□□ -0.04
PIF1Q9H611 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PIF1Q9H611 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PIF1Q9H611 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.79□□□□□ -0.04
PIF1Q9H611 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
PIF1Q9H611 MIR940-201ENST00000401276 94 ntBASIC14.79□□□□□ -0.04
PIF1Q9H611 AZGP1P1-201ENST00000411909 902 ntBASIC14.79□□□□□ -0.04
PIF1Q9H611 ACE3P-201ENST00000423435 1973 ntBASIC14.79□□□□□ -0.04
PIF1Q9H611 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14.79□□□□□ -0.04
PIF1Q9H611 AKAP8P1-201ENST00000434743 1349 ntBASIC14.79□□□□□ -0.04
PIF1Q9H611 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PIF1Q9H611 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC14.79□□□□□ -0.04
PIF1Q9H611 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PIF1Q9H611 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.79□□□□□ -0.04
PIF1Q9H611 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
PIF1Q9H611 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
PIF1Q9H611 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC14.79□□□□□ -0.04
PIF1Q9H611 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
PIF1Q9H611 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PIF1Q9H611 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC14.79□□□□□ -0.04
PIF1Q9H611 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PIF1Q9H611 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PIF1Q9H611 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC14.79□□□□□ -0.04
PIF1Q9H611 AC097359.2-201ENST00000604992 2389 ntBASIC14.79□□□□□ -0.04
PIF1Q9H611 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms