Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF41Q9H4P4 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC18.1■□□□□ 0.49
RNF41Q9H4P4 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF41Q9H4P4 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RNF41Q9H4P4 KRT8P35-201ENST00000483942 1338 ntBASIC18.1■□□□□ 0.49
RNF41Q9H4P4 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC18.1■□□□□ 0.49
RNF41Q9H4P4 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF41Q9H4P4 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF41Q9H4P4 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RNF41Q9H4P4 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
RNF41Q9H4P4 ACTBP8-201ENST00000403258 1108 ntBASIC18.1■□□□□ 0.49
RNF41Q9H4P4 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC18.1■□□□□ 0.49
RNF41Q9H4P4 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC18.1■□□□□ 0.49
RNF41Q9H4P4 AL355864.2-201ENST00000447420 863 ntBASIC18.1■□□□□ 0.49
RNF41Q9H4P4 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC18.1■□□□□ 0.49
RNF41Q9H4P4 USP32P1-208ENST00000506594 1164 ntBASIC18.1■□□□□ 0.49
RNF41Q9H4P4 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC18.1■□□□□ 0.49
RNF41Q9H4P4 SLC25A47P1-201ENST00000531577 414 ntBASIC18.1■□□□□ 0.49
RNF41Q9H4P4 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
RNF41Q9H4P4 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC18.1■□□□□ 0.49
RNF41Q9H4P4 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC18.1■□□□□ 0.49
RNF41Q9H4P4 AC233724.13-201ENST00000598383 410 ntBASIC18.1■□□□□ 0.49
RNF41Q9H4P4 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
RNF41Q9H4P4 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF41Q9H4P4 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RNF41Q9H4P4 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
RNF41Q9H4P4 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF41Q9H4P4 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF41Q9H4P4 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF41Q9H4P4 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF41Q9H4P4 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC18.09■□□□□ 0.49
RNF41Q9H4P4 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF41Q9H4P4 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF41Q9H4P4 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RNF41Q9H4P4 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC18.09■□□□□ 0.49
RNF41Q9H4P4 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF41Q9H4P4 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
RNF41Q9H4P4 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC18.09■□□□□ 0.49
RNF41Q9H4P4 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
RNF41Q9H4P4 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF41Q9H4P4 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF41Q9H4P4 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC18.09■□□□□ 0.49
RNF41Q9H4P4 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC18.09■□□□□ 0.49
RNF41Q9H4P4 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC18.09■□□□□ 0.49
RNF41Q9H4P4 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC18.09■□□□□ 0.49
RNF41Q9H4P4 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF41Q9H4P4 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF41Q9H4P4 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC18.09■□□□□ 0.49
RNF41Q9H4P4 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF41Q9H4P4 AC005229.1-201ENST00000392885 409 ntBASIC18.09■□□□□ 0.49
RNF41Q9H4P4 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
RNF41Q9H4P4 TMEM14DP-201ENST00000422205 345 ntBASIC18.09■□□□□ 0.49
RNF41Q9H4P4 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC18.09■□□□□ 0.49
RNF41Q9H4P4 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
RNF41Q9H4P4 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC18.09■□□□□ 0.49
RNF41Q9H4P4 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RNF41Q9H4P4 AP001889.1-201ENST00000525414 633 ntBASIC18.09■□□□□ 0.49
RNF41Q9H4P4 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC18.09■□□□□ 0.49
RNF41Q9H4P4 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC18.09■□□□□ 0.49
RNF41Q9H4P4 BTNL10-201ENST00000595971 695 ntBASIC18.09■□□□□ 0.49
RNF41Q9H4P4 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC18.09■□□□□ 0.49
RNF41Q9H4P4 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RNF41Q9H4P4 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF41Q9H4P4 AC104640.1-201ENST00000562617 2109 ntBASIC18.08■□□□□ 0.49
RNF41Q9H4P4 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC18.08■□□□□ 0.49
RNF41Q9H4P4 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RNF41Q9H4P4 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC18.08■□□□□ 0.49
RNF41Q9H4P4 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.49
RNF41Q9H4P4 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RNF41Q9H4P4 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RNF41Q9H4P4 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RNF41Q9H4P4 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RNF41Q9H4P4 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
RNF41Q9H4P4 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC18.08■□□□□ 0.49
RNF41Q9H4P4 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RNF41Q9H4P4 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RNF41Q9H4P4 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RNF41Q9H4P4 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC18.08■□□□□ 0.48
RNF41Q9H4P4 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RNF41Q9H4P4 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RNF41Q9H4P4 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
RNF41Q9H4P4 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
RNF41Q9H4P4 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC18.08■□□□□ 0.48
RNF41Q9H4P4 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC18.08■□□□□ 0.48
RNF41Q9H4P4 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RNF41Q9H4P4 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RNF41Q9H4P4 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC18.08■□□□□ 0.48
RNF41Q9H4P4 AC106886.1-201ENST00000568660 600 ntBASIC18.08■□□□□ 0.48
RNF41Q9H4P4 AL022328.1-201ENST00000610050 478 ntBASIC18.08■□□□□ 0.48
RNF41Q9H4P4 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
RNF41Q9H4P4 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC18.08■□□□□ 0.48
RNF41Q9H4P4 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC18.08■□□□□ 0.48
RNF41Q9H4P4 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC18.08■□□□□ 0.48
RNF41Q9H4P4 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC18.08■□□□□ 0.48
RNF41Q9H4P4 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RNF41Q9H4P4 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RNF41Q9H4P4 MSTO2P-201ENST00000314835 1709 ntBASIC18.08■□□□□ 0.48
RNF41Q9H4P4 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
RNF41Q9H4P4 MST1L-201ENST00000442552 2185 ntBASIC18.08■□□□□ 0.48
RNF41Q9H4P4 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms