Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRIM2Q9C040 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.23□□□□□ -0.13
TRIM2Q9C040 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.22□□□□□ -0.13
TRIM2Q9C040 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.22□□□□□ -0.13
TRIM2Q9C040 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
TRIM2Q9C040 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
TRIM2Q9C040 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.22□□□□□ -0.13
TRIM2Q9C040 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRIM2Q9C040 AC067750.1-201ENST00000608826 6545 ntBASIC14.22□□□□□ -0.13
TRIM2Q9C040 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRIM2Q9C040 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC14.22□□□□□ -0.13
TRIM2Q9C040 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.22□□□□□ -0.13
TRIM2Q9C040 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
TRIM2Q9C040 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRIM2Q9C040 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
TRIM2Q9C040 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRIM2Q9C040 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC14.22□□□□□ -0.13
TRIM2Q9C040 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
TRIM2Q9C040 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC14.22□□□□□ -0.13
TRIM2Q9C040 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRIM2Q9C040 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.22□□□□□ -0.13
TRIM2Q9C040 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRIM2Q9C040 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRIM2Q9C040 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
TRIM2Q9C040 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
TRIM2Q9C040 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRIM2Q9C040 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRIM2Q9C040 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
TRIM2Q9C040 AL035633.1-201ENST00000406139 838 ntBASIC14.22□□□□□ -0.13
TRIM2Q9C040 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC14.22□□□□□ -0.13
TRIM2Q9C040 KRT18P64-201ENST00000434946 1219 ntBASIC14.22□□□□□ -0.13
TRIM2Q9C040 LHX6-205ENST00000464484 666 ntTSL 2 BASIC14.22□□□□□ -0.13
TRIM2Q9C040 KRT18P43-201ENST00000469825 1281 ntBASIC14.22□□□□□ -0.13
TRIM2Q9C040 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC14.22□□□□□ -0.13
TRIM2Q9C040 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC14.22□□□□□ -0.13
TRIM2Q9C040 IGHV3-42-201ENST00000520410 361 ntBASIC14.22□□□□□ -0.13
TRIM2Q9C040 AC027369.6-201ENST00000525520 931 ntBASIC14.22□□□□□ -0.13
TRIM2Q9C040 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC14.22□□□□□ -0.13
TRIM2Q9C040 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC14.22□□□□□ -0.13
TRIM2Q9C040 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRIM2Q9C040 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
TRIM2Q9C040 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC14.22□□□□□ -0.13
TRIM2Q9C040 NAA60-208ENST00000570819 833 ntTSL 2 BASIC14.22□□□□□ -0.13
TRIM2Q9C040 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC14.22□□□□□ -0.13
TRIM2Q9C040 UBL5-208ENST00000593087 320 ntTSL 3 BASIC14.22□□□□□ -0.13
TRIM2Q9C040 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.22□□□□□ -0.13
TRIM2Q9C040 AL390754.1-201ENST00000619088 582 ntBASIC14.22□□□□□ -0.13
TRIM2Q9C040 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC14.22□□□□□ -0.13
TRIM2Q9C040 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC14.22□□□□□ -0.13
TRIM2Q9C040 CYP2AB1P-202ENST00000454440 1456 ntBASIC14.22□□□□□ -0.13
TRIM2Q9C040 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC14.22□□□□□ -0.13
TRIM2Q9C040 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC14.22□□□□□ -0.13
TRIM2Q9C040 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRIM2Q9C040 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRIM2Q9C040 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRIM2Q9C040 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRIM2Q9C040 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.22□□□□□ -0.13
TRIM2Q9C040 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRIM2Q9C040 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
TRIM2Q9C040 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRIM2Q9C040 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.22□□□□□ -0.13
TRIM2Q9C040 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRIM2Q9C040 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC14.22□□□□□ -0.13
TRIM2Q9C040 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC14.21□□□□□ -0.13
TRIM2Q9C040 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRIM2Q9C040 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRIM2Q9C040 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.21□□□□□ -0.13
TRIM2Q9C040 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC14.21□□□□□ -0.13
TRIM2Q9C040 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRIM2Q9C040 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRIM2Q9C040 AC087499.5-201ENST00000452760 1342 ntBASIC14.21□□□□□ -0.13
TRIM2Q9C040 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRIM2Q9C040 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
TRIM2Q9C040 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRIM2Q9C040 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.21□□□□□ -0.13
TRIM2Q9C040 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
TRIM2Q9C040 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
TRIM2Q9C040 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRIM2Q9C040 AC138969.3-201ENST00000546612 1459 ntBASIC14.21□□□□□ -0.13
TRIM2Q9C040 AC138932.2-201ENST00000548268 1459 ntBASIC14.21□□□□□ -0.13
TRIM2Q9C040 AC126755.4-201ENST00000549796 1459 ntBASIC14.21□□□□□ -0.13
TRIM2Q9C040 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRIM2Q9C040 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRIM2Q9C040 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRIM2Q9C040 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRIM2Q9C040 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRIM2Q9C040 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC14.21□□□□□ -0.13
TRIM2Q9C040 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC14.21□□□□□ -0.13
TRIM2Q9C040 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC14.21□□□□□ -0.13
TRIM2Q9C040 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRIM2Q9C040 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRIM2Q9C040 AC097493.3-201ENST00000509725 367 ntBASIC14.21□□□□□ -0.13
TRIM2Q9C040 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC14.21□□□□□ -0.13
TRIM2Q9C040 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRIM2Q9C040 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRIM2Q9C040 TBCB-211ENST00000589996 724 ntTSL 3 BASIC14.21□□□□□ -0.13
TRIM2Q9C040 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC14.21□□□□□ -0.13
TRIM2Q9C040 AF228730.6-201ENST00000641497 218 ntBASIC14.21□□□□□ -0.13
TRIM2Q9C040 AL645728.2-202ENST00000641679 227 ntBASIC14.21□□□□□ -0.13
TRIM2Q9C040 AC084121.3-201ENST00000641716 218 ntBASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms