Protein–RNA interactions for Protein: Q9BX63

BRIP1, Fanconi anemia group J protein, humanhuman

Predictions only

Length 1,249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1Q9BX63 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
BRIP1Q9BX63 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC18.81■□□□□ 0.6
BRIP1Q9BX63 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
BRIP1Q9BX63 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
BRIP1Q9BX63 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC18.81■□□□□ 0.6
BRIP1Q9BX63 CDC23-208ENST00000505120 455 ntTSL 3 BASIC18.81■□□□□ 0.6
BRIP1Q9BX63 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
BRIP1Q9BX63 AC242376.1-201ENST00000559033 726 ntBASIC18.81■□□□□ 0.6
BRIP1Q9BX63 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC18.81■□□□□ 0.6
BRIP1Q9BX63 DUX4L46-201ENST00000566845 751 ntBASIC18.81■□□□□ 0.6
BRIP1Q9BX63 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC18.81■□□□□ 0.6
BRIP1Q9BX63 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC18.81■□□□□ 0.6
BRIP1Q9BX63 AC103691.2-201ENST00000618824 433 ntBASIC18.81■□□□□ 0.6
BRIP1Q9BX63 AC002472.3-201ENST00000640124 621 ntBASIC18.81■□□□□ 0.6
BRIP1Q9BX63 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
BRIP1Q9BX63 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC18.81■□□□□ 0.6
BRIP1Q9BX63 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
BRIP1Q9BX63 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
BRIP1Q9BX63 REXO1L5P-201ENST00000622260 2098 ntBASIC18.81■□□□□ 0.6
BRIP1Q9BX63 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
BRIP1Q9BX63 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
BRIP1Q9BX63 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC18.81■□□□□ 0.6
BRIP1Q9BX63 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
BRIP1Q9BX63 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC18.81■□□□□ 0.6
BRIP1Q9BX63 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
BRIP1Q9BX63 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
BRIP1Q9BX63 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
BRIP1Q9BX63 SHC1P1-201ENST00000425230 1745 ntBASIC18.8■□□□□ 0.6
BRIP1Q9BX63 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
BRIP1Q9BX63 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
BRIP1Q9BX63 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BRIP1Q9BX63 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
BRIP1Q9BX63 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
BRIP1Q9BX63 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC18.8■□□□□ 0.6
BRIP1Q9BX63 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC18.8■□□□□ 0.6
BRIP1Q9BX63 AC010141.1-201ENST00000411585 623 ntBASIC18.8■□□□□ 0.6
BRIP1Q9BX63 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC18.8■□□□□ 0.6
BRIP1Q9BX63 FAM58BP-201ENST00000439056 645 ntBASIC18.8■□□□□ 0.6
BRIP1Q9BX63 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC18.8■□□□□ 0.6
BRIP1Q9BX63 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC18.8■□□□□ 0.6
BRIP1Q9BX63 AC116345.2-201ENST00000512837 523 ntBASIC18.8■□□□□ 0.6
BRIP1Q9BX63 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC18.8■□□□□ 0.6
BRIP1Q9BX63 RTN3P1-201ENST00000536295 711 ntBASIC18.8■□□□□ 0.6
BRIP1Q9BX63 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC18.8■□□□□ 0.6
BRIP1Q9BX63 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC18.8■□□□□ 0.6
BRIP1Q9BX63 AC011491.1-203ENST00000637688 543 ntBASIC18.8■□□□□ 0.6
BRIP1Q9BX63 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
BRIP1Q9BX63 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BRIP1Q9BX63 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BRIP1Q9BX63 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BRIP1Q9BX63 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
BRIP1Q9BX63 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BRIP1Q9BX63 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
BRIP1Q9BX63 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
BRIP1Q9BX63 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC18.8■□□□□ 0.6
BRIP1Q9BX63 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BRIP1Q9BX63 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BRIP1Q9BX63 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
BRIP1Q9BX63 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BRIP1Q9BX63 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
BRIP1Q9BX63 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
BRIP1Q9BX63 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
BRIP1Q9BX63 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.79■□□□□ 0.6
BRIP1Q9BX63 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
BRIP1Q9BX63 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
BRIP1Q9BX63 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BRIP1Q9BX63 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
BRIP1Q9BX63 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BRIP1Q9BX63 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
BRIP1Q9BX63 AC010491.1-201ENST00000563101 2797 ntBASIC18.79■□□□□ 0.6
BRIP1Q9BX63 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC18.79■□□□□ 0.6
BRIP1Q9BX63 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
BRIP1Q9BX63 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC18.79■□□□□ 0.6
BRIP1Q9BX63 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC18.79■□□□□ 0.6
BRIP1Q9BX63 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BRIP1Q9BX63 AK6-201ENST00000380818 1183 ntTSL 2 BASIC18.79■□□□□ 0.6
BRIP1Q9BX63 HNRNPA1P41-201ENST00000397777 928 ntBASIC18.79■□□□□ 0.6
BRIP1Q9BX63 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC18.79■□□□□ 0.6
BRIP1Q9BX63 AC098935.1-201ENST00000446057 611 ntBASIC18.79■□□□□ 0.6
BRIP1Q9BX63 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC18.79■□□□□ 0.6
BRIP1Q9BX63 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC18.79■□□□□ 0.6
BRIP1Q9BX63 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC18.79■□□□□ 0.6
BRIP1Q9BX63 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC18.79■□□□□ 0.6
BRIP1Q9BX63 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
BRIP1Q9BX63 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BRIP1Q9BX63 OR6D1P-203ENST00000641209 4860 ntBASIC18.79■□□□□ 0.6
BRIP1Q9BX63 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
BRIP1Q9BX63 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BRIP1Q9BX63 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
BRIP1Q9BX63 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
BRIP1Q9BX63 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
BRIP1Q9BX63 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
BRIP1Q9BX63 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
BRIP1Q9BX63 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
BRIP1Q9BX63 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC18.79■□□□□ 0.6
BRIP1Q9BX63 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
BRIP1Q9BX63 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC18.78■□□□□ 0.6
BRIP1Q9BX63 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BRIP1Q9BX63 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
BRIP1Q9BX63 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 319.6 ms