Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
TRIM47Q96LD4 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC18.02■□□□□ 0.47
TRIM47Q96LD4 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
TRIM47Q96LD4 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
TRIM47Q96LD4 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
TRIM47Q96LD4 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC18.02■□□□□ 0.47
TRIM47Q96LD4 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC18.01■□□□□ 0.47
TRIM47Q96LD4 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
TRIM47Q96LD4 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM47Q96LD4 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC18.01■□□□□ 0.47
TRIM47Q96LD4 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM47Q96LD4 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC18.01■□□□□ 0.47
TRIM47Q96LD4 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC18.01■□□□□ 0.47
TRIM47Q96LD4 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM47Q96LD4 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM47Q96LD4 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM47Q96LD4 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC18.01■□□□□ 0.47
TRIM47Q96LD4 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM47Q96LD4 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM47Q96LD4 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC18.01■□□□□ 0.47
TRIM47Q96LD4 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM47Q96LD4 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC18.01■□□□□ 0.47
TRIM47Q96LD4 AC004898.1-201ENST00000451057 766 ntBASIC18.01■□□□□ 0.47
TRIM47Q96LD4 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC18.01■□□□□ 0.47
TRIM47Q96LD4 ADM-202ENST00000524948 584 ntTSL 2 BASIC18.01■□□□□ 0.47
TRIM47Q96LD4 IFT20-206ENST00000578122 834 ntTSL 2 BASIC18.01■□□□□ 0.47
TRIM47Q96LD4 IFT20-208ENST00000578985 831 ntTSL 3 BASIC18.01■□□□□ 0.47
TRIM47Q96LD4 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM47Q96LD4 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM47Q96LD4 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC18.01■□□□□ 0.47
TRIM47Q96LD4 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM47Q96LD4 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM47Q96LD4 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM47Q96LD4 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM47Q96LD4 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM47Q96LD4 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
TRIM47Q96LD4 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM47Q96LD4 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM47Q96LD4 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC18.01■□□□□ 0.47
TRIM47Q96LD4 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
TRIM47Q96LD4 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC18■□□□□ 0.47
TRIM47Q96LD4 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
TRIM47Q96LD4 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC18■□□□□ 0.47
TRIM47Q96LD4 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
TRIM47Q96LD4 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC18■□□□□ 0.47
TRIM47Q96LD4 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
TRIM47Q96LD4 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC18■□□□□ 0.47
TRIM47Q96LD4 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRIM47Q96LD4 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC18■□□□□ 0.47
TRIM47Q96LD4 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRIM47Q96LD4 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC18■□□□□ 0.47
TRIM47Q96LD4 TEX30-203ENST00000376022 828 ntTSL 2 BASIC18■□□□□ 0.47
TRIM47Q96LD4 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC18■□□□□ 0.47
TRIM47Q96LD4 FXNP2-201ENST00000411625 547 ntBASIC18■□□□□ 0.47
TRIM47Q96LD4 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC18■□□□□ 0.47
TRIM47Q96LD4 AC245100.5-201ENST00000452108 331 ntBASIC18■□□□□ 0.47
TRIM47Q96LD4 BX284668.4-201ENST00000453917 508 ntBASIC18■□□□□ 0.47
TRIM47Q96LD4 AC091804.1-201ENST00000486888 567 ntBASIC18■□□□□ 0.47
TRIM47Q96LD4 HIST2H2BC-201ENST00000498492 580 ntBASIC18■□□□□ 0.47
TRIM47Q96LD4 AC026410.3-201ENST00000514280 936 ntBASIC18■□□□□ 0.47
TRIM47Q96LD4 RERG-205ENST00000537647 935 ntTSL 2 BASIC18■□□□□ 0.47
TRIM47Q96LD4 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC18■□□□□ 0.47
TRIM47Q96LD4 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC18■□□□□ 0.47
TRIM47Q96LD4 AC000095.1-201ENST00000603208 874 ntBASIC18■□□□□ 0.47
TRIM47Q96LD4 AC138951.2-201ENST00000623455 1161 ntBASIC18■□□□□ 0.47
TRIM47Q96LD4 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC18■□□□□ 0.47
TRIM47Q96LD4 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
TRIM47Q96LD4 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC18■□□□□ 0.47
TRIM47Q96LD4 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
TRIM47Q96LD4 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC18■□□□□ 0.47
TRIM47Q96LD4 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC18■□□□□ 0.47
TRIM47Q96LD4 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC18■□□□□ 0.47
TRIM47Q96LD4 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
TRIM47Q96LD4 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC18■□□□□ 0.47
TRIM47Q96LD4 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC18■□□□□ 0.47
TRIM47Q96LD4 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRIM47Q96LD4 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC18■□□□□ 0.47
TRIM47Q96LD4 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC18■□□□□ 0.47
TRIM47Q96LD4 SLC9A7P1-201ENST00000554295 3311 ntBASIC18■□□□□ 0.47
TRIM47Q96LD4 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
TRIM47Q96LD4 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC17.99■□□□□ 0.47
TRIM47Q96LD4 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC17.99■□□□□ 0.47
TRIM47Q96LD4 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM47Q96LD4 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
TRIM47Q96LD4 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
TRIM47Q96LD4 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
TRIM47Q96LD4 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM47Q96LD4 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM47Q96LD4 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC17.99■□□□□ 0.47
TRIM47Q96LD4 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC17.99■□□□□ 0.47
TRIM47Q96LD4 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM47Q96LD4 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM47Q96LD4 AL662890.1-201ENST00000396818 632 ntBASIC17.99■□□□□ 0.47
TRIM47Q96LD4 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC17.99■□□□□ 0.47
TRIM47Q96LD4 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
TRIM47Q96LD4 GGCT-203ENST00000409144 836 ntTSL 2 BASIC17.99■□□□□ 0.47
TRIM47Q96LD4 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC17.99■□□□□ 0.47
TRIM47Q96LD4 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
TRIM47Q96LD4 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC17.99■□□□□ 0.47
TRIM47Q96LD4 EIF4HP1-201ENST00000453115 687 ntBASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms