Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 CDKN2C-202ENST00000371761 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ALPK3Q96L96 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ALPK3Q96L96 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ALPK3Q96L96 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC16.28■□□□□ 0.2
ALPK3Q96L96 ARPP19-206ENST00000564163 718 ntTSL 2 BASIC16.28■□□□□ 0.2
ALPK3Q96L96 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC16.28■□□□□ 0.2
ALPK3Q96L96 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC16.28■□□□□ 0.2
ALPK3Q96L96 AC007326.1-201ENST00000604539 458 ntBASIC16.28■□□□□ 0.2
ALPK3Q96L96 AC004686.1-201ENST00000605113 538 ntBASIC16.28■□□□□ 0.2
ALPK3Q96L96 AL627230.2-201ENST00000613254 655 ntBASIC16.28■□□□□ 0.2
ALPK3Q96L96 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ALPK3Q96L96 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ALPK3Q96L96 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC16.28■□□□□ 0.2
ALPK3Q96L96 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
ALPK3Q96L96 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
ALPK3Q96L96 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC16.28■□□□□ 0.2
ALPK3Q96L96 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.28■□□□□ 0.2
ALPK3Q96L96 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ALPK3Q96L96 AL360270.3-201ENST00000609118 1348 ntBASIC16.28■□□□□ 0.2
ALPK3Q96L96 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ALPK3Q96L96 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC16.28■□□□□ 0.2
ALPK3Q96L96 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ALPK3Q96L96 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ALPK3Q96L96 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
ALPK3Q96L96 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ALPK3Q96L96 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC16.27■□□□□ 0.2
ALPK3Q96L96 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
ALPK3Q96L96 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ALPK3Q96L96 PROK2-201ENST00000295619 1022 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ALPK3Q96L96 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC16.27■□□□□ 0.2
ALPK3Q96L96 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ALPK3Q96L96 LINC01056-201ENST00000455711 1234 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ALPK3Q96L96 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ALPK3Q96L96 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
ALPK3Q96L96 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC16.27■□□□□ 0.2
ALPK3Q96L96 AC009884.2-201ENST00000603110 324 ntBASIC16.27■□□□□ 0.2
ALPK3Q96L96 MARK2P16-201ENST00000605714 1723 ntBASIC16.27■□□□□ 0.2
ALPK3Q96L96 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ALPK3Q96L96 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
ALPK3Q96L96 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
ALPK3Q96L96 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
ALPK3Q96L96 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ALPK3Q96L96 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ALPK3Q96L96 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
ALPK3Q96L96 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
ALPK3Q96L96 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ALPK3Q96L96 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
ALPK3Q96L96 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ALPK3Q96L96 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.27■□□□□ 0.19
ALPK3Q96L96 ZNF436-AS1-201ENST00000335648 2547 ntBASIC16.27■□□□□ 0.19
ALPK3Q96L96 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
ALPK3Q96L96 BAK1P1-201ENST00000317045 636 ntBASIC16.27■□□□□ 0.19
ALPK3Q96L96 SURF4-203ENST00000371991 715 ntTSL 3 BASIC16.27■□□□□ 0.19
ALPK3Q96L96 RN7SKP109-201ENST00000410592 316 ntBASIC16.27■□□□□ 0.19
ALPK3Q96L96 AC108734.2-201ENST00000420887 1069 ntBASIC16.27■□□□□ 0.19
ALPK3Q96L96 AL592076.1-201ENST00000424448 303 ntBASIC16.27■□□□□ 0.19
ALPK3Q96L96 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC16.27■□□□□ 0.19
ALPK3Q96L96 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
ALPK3Q96L96 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
ALPK3Q96L96 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
ALPK3Q96L96 MT3-203ENST00000565838 421 ntTSL 3 BASIC16.27■□□□□ 0.19
ALPK3Q96L96 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC16.27■□□□□ 0.19
ALPK3Q96L96 AL451007.2-201ENST00000632004 563 ntBASIC16.27■□□□□ 0.19
ALPK3Q96L96 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC16.27■□□□□ 0.19
ALPK3Q96L96 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ALPK3Q96L96 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ALPK3Q96L96 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
ALPK3Q96L96 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ALPK3Q96L96 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC16.26■□□□□ 0.19
ALPK3Q96L96 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
ALPK3Q96L96 SLC9A7P1-202ENST00000556476 2239 ntBASIC16.26■□□□□ 0.19
ALPK3Q96L96 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC16.26■□□□□ 0.19
ALPK3Q96L96 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
ALPK3Q96L96 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
ALPK3Q96L96 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ALPK3Q96L96 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
ALPK3Q96L96 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ALPK3Q96L96 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
ALPK3Q96L96 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ALPK3Q96L96 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
ALPK3Q96L96 EHMT2-AS1-201ENST00000434689 373 ntTSL 3 BASIC16.26■□□□□ 0.19
ALPK3Q96L96 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC16.26■□□□□ 0.19
ALPK3Q96L96 RPS23-204ENST00000507980 836 ntTSL 2 BASIC16.26■□□□□ 0.19
ALPK3Q96L96 FAM86B3P-203ENST00000523992 854 ntBASIC16.26■□□□□ 0.19
ALPK3Q96L96 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC16.26■□□□□ 0.19
ALPK3Q96L96 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC16.26■□□□□ 0.19
ALPK3Q96L96 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC16.26■□□□□ 0.19
ALPK3Q96L96 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
ALPK3Q96L96 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC16.26■□□□□ 0.19
ALPK3Q96L96 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC16.26■□□□□ 0.19
ALPK3Q96L96 PEBP1P2-201ENST00000603980 558 ntBASIC16.26■□□□□ 0.19
ALPK3Q96L96 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ALPK3Q96L96 AP001184.1-201ENST00000637936 376 ntBASIC16.26■□□□□ 0.19
ALPK3Q96L96 IQSEC2-207ENST00000638583 722 ntTSL 5 BASIC16.26■□□□□ 0.19
ALPK3Q96L96 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.26■□□□□ 0.19
ALPK3Q96L96 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
ALPK3Q96L96 SLC50A1-203ENST00000368404 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ALPK3Q96L96 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
ALPK3Q96L96 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
ALPK3Q96L96 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms