Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SNX27Q96L92 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
SNX27Q96L92 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
SNX27Q96L92 KRT8P19-201ENST00000551916 1455 ntBASIC16.54■□□□□ 0.24
SNX27Q96L92 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
SNX27Q96L92 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SNX27Q96L92 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SNX27Q96L92 SSR4P1-203ENST00000599569 2260 ntBASIC16.54■□□□□ 0.24
SNX27Q96L92 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
SNX27Q96L92 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SNX27Q96L92 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SNX27Q96L92 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.54■□□□□ 0.24
SNX27Q96L92 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.54■□□□□ 0.24
SNX27Q96L92 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
SNX27Q96L92 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.54■□□□□ 0.24
SNX27Q96L92 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.54■□□□□ 0.24
SNX27Q96L92 TMBIM7P-203ENST00000641617 1718 ntBASIC16.54■□□□□ 0.24
SNX27Q96L92 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SNX27Q96L92 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC16.54■□□□□ 0.24
SNX27Q96L92 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.54■□□□□ 0.24
SNX27Q96L92 AC008741.2-201ENST00000612792 3115 ntBASIC16.54■□□□□ 0.24
SNX27Q96L92 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SNX27Q96L92 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SNX27Q96L92 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SNX27Q96L92 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SNX27Q96L92 LSM5-207ENST00000410044 687 ntTSL 3 BASIC16.54■□□□□ 0.24
SNX27Q96L92 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SNX27Q96L92 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SNX27Q96L92 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC16.54■□□□□ 0.24
SNX27Q96L92 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC16.54■□□□□ 0.24
SNX27Q96L92 EMC4-209ENST00000559421 497 ntTSL 2 BASIC16.54■□□□□ 0.24
SNX27Q96L92 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC16.54■□□□□ 0.24
SNX27Q96L92 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC16.54■□□□□ 0.24
SNX27Q96L92 RHOXF1P1-202ENST00000635473 501 ntBASIC16.54■□□□□ 0.24
SNX27Q96L92 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SNX27Q96L92 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SNX27Q96L92 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC16.54■□□□□ 0.24
SNX27Q96L92 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
SNX27Q96L92 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SNX27Q96L92 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SNX27Q96L92 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
SNX27Q96L92 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SNX27Q96L92 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SNX27Q96L92 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.54■□□□□ 0.24
SNX27Q96L92 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
SNX27Q96L92 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SNX27Q96L92 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SNX27Q96L92 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
SNX27Q96L92 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SNX27Q96L92 LRRC59-203ENST00000576448 1531 ntBASIC16.54■□□□□ 0.24
SNX27Q96L92 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SNX27Q96L92 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.54■□□□□ 0.24
SNX27Q96L92 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SNX27Q96L92 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC16.53■□□□□ 0.24
SNX27Q96L92 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
SNX27Q96L92 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.53■□□□□ 0.24
SNX27Q96L92 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
SNX27Q96L92 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
SNX27Q96L92 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SNX27Q96L92 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.53■□□□□ 0.24
SNX27Q96L92 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SNX27Q96L92 C18orf15-201ENST00000623680 2534 ntBASIC16.53■□□□□ 0.24
SNX27Q96L92 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.53■□□□□ 0.24
SNX27Q96L92 REXO1L4P-201ENST00000605109 1937 ntBASIC16.53■□□□□ 0.24
SNX27Q96L92 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
SNX27Q96L92 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SNX27Q96L92 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
SNX27Q96L92 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SNX27Q96L92 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
SNX27Q96L92 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.53■□□□□ 0.24
SNX27Q96L92 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC16.53■□□□□ 0.24
SNX27Q96L92 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
SNX27Q96L92 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SNX27Q96L92 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SNX27Q96L92 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SNX27Q96L92 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SNX27Q96L92 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
SNX27Q96L92 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SNX27Q96L92 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC16.53■□□□□ 0.24
SNX27Q96L92 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC16.53■□□□□ 0.24
SNX27Q96L92 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC16.53■□□□□ 0.24
SNX27Q96L92 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC16.53■□□□□ 0.24
SNX27Q96L92 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC16.53■□□□□ 0.24
SNX27Q96L92 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SNX27Q96L92 EIF3FP3-201ENST00000434851 1086 ntBASIC16.53■□□□□ 0.24
SNX27Q96L92 AL590640.2-201ENST00000457038 527 ntBASIC16.53■□□□□ 0.24
SNX27Q96L92 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC16.53■□□□□ 0.24
SNX27Q96L92 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC16.53■□□□□ 0.24
SNX27Q96L92 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC16.53■□□□□ 0.24
SNX27Q96L92 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC16.53■□□□□ 0.24
SNX27Q96L92 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC16.53■□□□□ 0.24
SNX27Q96L92 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC16.53■□□□□ 0.24
SNX27Q96L92 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.53■□□□□ 0.24
SNX27Q96L92 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SNX27Q96L92 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SNX27Q96L92 STRN-202ENST00000379213 2254 ntTSL 5 BASIC16.53■□□□□ 0.24
SNX27Q96L92 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SNX27Q96L92 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SNX27Q96L92 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
SNX27Q96L92 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms