Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC18.4■□□□□ 0.54
CHMP4CQ96CF2 AC097376.2-205ENST00000610159 5334 ntBASIC18.4■□□□□ 0.54
CHMP4CQ96CF2 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
CHMP4CQ96CF2 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
CHMP4CQ96CF2 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHMP4CQ96CF2 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHMP4CQ96CF2 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHMP4CQ96CF2 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHMP4CQ96CF2 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC18.4■□□□□ 0.54
CHMP4CQ96CF2 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC18.4■□□□□ 0.54
CHMP4CQ96CF2 RN7SL837P-201ENST00000463010 287 ntBASIC18.4■□□□□ 0.54
CHMP4CQ96CF2 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC18.4■□□□□ 0.54
CHMP4CQ96CF2 RN7SL399P-201ENST00000471648 279 ntBASIC18.4■□□□□ 0.54
CHMP4CQ96CF2 PUDP-206ENST00000540122 825 ntTSL 2 BASIC18.4■□□□□ 0.54
CHMP4CQ96CF2 RARRES2P5-201ENST00000564013 466 ntBASIC18.4■□□□□ 0.54
CHMP4CQ96CF2 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC18.4■□□□□ 0.54
CHMP4CQ96CF2 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHMP4CQ96CF2 AC093726.1-201ENST00000608064 963 ntBASIC18.4■□□□□ 0.54
CHMP4CQ96CF2 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC18.4■□□□□ 0.54
CHMP4CQ96CF2 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHMP4CQ96CF2 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHMP4CQ96CF2 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHMP4CQ96CF2 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CHMP4CQ96CF2 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHMP4CQ96CF2 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC18.4■□□□□ 0.54
CHMP4CQ96CF2 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CHMP4CQ96CF2 AL391825.1-201ENST00000457671 1364 ntBASIC18.4■□□□□ 0.54
CHMP4CQ96CF2 RERG-209ENST00000546331 1383 ntTSL 2 BASIC18.4■□□□□ 0.54
CHMP4CQ96CF2 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
CHMP4CQ96CF2 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC18.4■□□□□ 0.54
CHMP4CQ96CF2 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CHMP4CQ96CF2 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CHMP4CQ96CF2 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC18.4■□□□□ 0.54
CHMP4CQ96CF2 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CHMP4CQ96CF2 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHMP4CQ96CF2 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CHMP4CQ96CF2 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
CHMP4CQ96CF2 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
CHMP4CQ96CF2 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
CHMP4CQ96CF2 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC18.39■□□□□ 0.54
CHMP4CQ96CF2 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHMP4CQ96CF2 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
CHMP4CQ96CF2 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHMP4CQ96CF2 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHMP4CQ96CF2 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
CHMP4CQ96CF2 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC18.39■□□□□ 0.53
CHMP4CQ96CF2 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHMP4CQ96CF2 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHMP4CQ96CF2 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHMP4CQ96CF2 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHMP4CQ96CF2 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CHMP4CQ96CF2 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
CHMP4CQ96CF2 MXI1-205ENST00000393134 889 ntTSL 2 BASIC18.39■□□□□ 0.53
CHMP4CQ96CF2 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC18.39■□□□□ 0.53
CHMP4CQ96CF2 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC18.39■□□□□ 0.53
CHMP4CQ96CF2 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC18.39■□□□□ 0.53
CHMP4CQ96CF2 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC18.39■□□□□ 0.53
CHMP4CQ96CF2 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
CHMP4CQ96CF2 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC18.39■□□□□ 0.53
CHMP4CQ96CF2 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHMP4CQ96CF2 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
CHMP4CQ96CF2 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC18.39■□□□□ 0.53
CHMP4CQ96CF2 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC18.39■□□□□ 0.53
CHMP4CQ96CF2 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC18.39■□□□□ 0.53
CHMP4CQ96CF2 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CHMP4CQ96CF2 AL358472.5-202ENST00000641448 1267 ntBASIC18.39■□□□□ 0.53
CHMP4CQ96CF2 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
CHMP4CQ96CF2 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHMP4CQ96CF2 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CHMP4CQ96CF2 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CHMP4CQ96CF2 AC009090.5-201ENST00000624886 2285 ntBASIC18.39■□□□□ 0.53
CHMP4CQ96CF2 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CHMP4CQ96CF2 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC18.39■□□□□ 0.53
CHMP4CQ96CF2 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CHMP4CQ96CF2 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
CHMP4CQ96CF2 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CHMP4CQ96CF2 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC18.39■□□□□ 0.53
CHMP4CQ96CF2 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHMP4CQ96CF2 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHMP4CQ96CF2 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
CHMP4CQ96CF2 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHMP4CQ96CF2 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHMP4CQ96CF2 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CHMP4CQ96CF2 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHMP4CQ96CF2 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
CHMP4CQ96CF2 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CHMP4CQ96CF2 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CHMP4CQ96CF2 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHMP4CQ96CF2 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHMP4CQ96CF2 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHMP4CQ96CF2 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CHMP4CQ96CF2 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHMP4CQ96CF2 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC18.38■□□□□ 0.53
CHMP4CQ96CF2 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHMP4CQ96CF2 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
CHMP4CQ96CF2 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHMP4CQ96CF2 GK-202ENST00000378941 458 ntTSL 3 BASIC18.38■□□□□ 0.53
CHMP4CQ96CF2 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC18.38■□□□□ 0.53
CHMP4CQ96CF2 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC18.38■□□□□ 0.53
CHMP4CQ96CF2 NAA50-208ENST00000497255 789 ntTSL 5 BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms