Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
PTP4A1Q93096 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PTP4A1Q93096 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PTP4A1Q93096 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PTP4A1Q93096 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PTP4A1Q93096 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
PTP4A1Q93096 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC13.88□□□□□ -0.19
PTP4A1Q93096 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PTP4A1Q93096 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
PTP4A1Q93096 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC13.88□□□□□ -0.19
PTP4A1Q93096 SPDYE14P-201ENST00000442619 822 ntBASIC13.88□□□□□ -0.19
PTP4A1Q93096 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
PTP4A1Q93096 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PTP4A1Q93096 AC025678.2-201ENST00000562061 970 ntBASIC13.88□□□□□ -0.19
PTP4A1Q93096 AC004449.1-201ENST00000564240 433 ntBASIC13.88□□□□□ -0.19
PTP4A1Q93096 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC13.88□□□□□ -0.19
PTP4A1Q93096 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC13.88□□□□□ -0.19
PTP4A1Q93096 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PTP4A1Q93096 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
PTP4A1Q93096 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC13.88□□□□□ -0.19
PTP4A1Q93096 AC005840.4-201ENST00000541242 2494 ntBASIC13.88□□□□□ -0.19
PTP4A1Q93096 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC13.88□□□□□ -0.19
PTP4A1Q93096 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
PTP4A1Q93096 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
PTP4A1Q93096 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
PTP4A1Q93096 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PTP4A1Q93096 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.87□□□□□ -0.19
PTP4A1Q93096 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC13.87□□□□□ -0.19
PTP4A1Q93096 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
PTP4A1Q93096 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
PTP4A1Q93096 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PTP4A1Q93096 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC13.87□□□□□ -0.19
PTP4A1Q93096 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PTP4A1Q93096 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PTP4A1Q93096 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PTP4A1Q93096 AL035456.1-201ENST00000456064 1369 ntBASIC13.87□□□□□ -0.19
PTP4A1Q93096 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
PTP4A1Q93096 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC13.87□□□□□ -0.19
PTP4A1Q93096 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
PTP4A1Q93096 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
PTP4A1Q93096 MTHFR-210ENST00000641407 2387 ntBASIC13.87□□□□□ -0.19
PTP4A1Q93096 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PTP4A1Q93096 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
PTP4A1Q93096 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC13.87□□□□□ -0.19
PTP4A1Q93096 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
PTP4A1Q93096 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PTP4A1Q93096 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
PTP4A1Q93096 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PTP4A1Q93096 HNRNPFP1-201ENST00000391730 1133 ntBASIC13.87□□□□□ -0.19
PTP4A1Q93096 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC13.87□□□□□ -0.19
PTP4A1Q93096 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC13.87□□□□□ -0.19
PTP4A1Q93096 TSEN15P1-201ENST00000423257 515 ntBASIC13.87□□□□□ -0.19
PTP4A1Q93096 KRT18P64-201ENST00000434946 1219 ntBASIC13.87□□□□□ -0.19
PTP4A1Q93096 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC13.87□□□□□ -0.19
PTP4A1Q93096 URGCP-206ENST00000446958 365 ntTSL 2 BASIC13.87□□□□□ -0.19
PTP4A1Q93096 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PTP4A1Q93096 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PTP4A1Q93096 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC13.87□□□□□ -0.19
PTP4A1Q93096 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC13.87□□□□□ -0.19
PTP4A1Q93096 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC13.87□□□□□ -0.19
PTP4A1Q93096 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC13.87□□□□□ -0.19
PTP4A1Q93096 AC015910.1-201ENST00000579400 975 ntBASIC13.87□□□□□ -0.19
PTP4A1Q93096 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PTP4A1Q93096 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC13.87□□□□□ -0.19
PTP4A1Q93096 AC027612.4-201ENST00000605371 583 ntBASIC13.87□□□□□ -0.19
PTP4A1Q93096 GPALPP1-207ENST00000611650 899 ntBASIC13.87□□□□□ -0.19
PTP4A1Q93096 AC006538.3-201ENST00000612495 578 ntBASIC13.87□□□□□ -0.19
PTP4A1Q93096 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC13.87□□□□□ -0.19
PTP4A1Q93096 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC13.87□□□□□ -0.19
PTP4A1Q93096 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PTP4A1Q93096 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PTP4A1Q93096 AC018529.2-202ENST00000611482 3087 ntBASIC13.87□□□□□ -0.19
PTP4A1Q93096 TK1-203ENST00000588734 1681 ntTSL 2 BASIC13.87□□□□□ -0.19
PTP4A1Q93096 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
PTP4A1Q93096 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PTP4A1Q93096 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PTP4A1Q93096 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PTP4A1Q93096 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PTP4A1Q93096 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PTP4A1Q93096 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PTP4A1Q93096 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PTP4A1Q93096 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PTP4A1Q93096 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
PTP4A1Q93096 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
PTP4A1Q93096 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PTP4A1Q93096 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC13.87□□□□□ -0.19
PTP4A1Q93096 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC13.87□□□□□ -0.19
PTP4A1Q93096 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PTP4A1Q93096 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
PTP4A1Q93096 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PTP4A1Q93096 Z97205.2-201ENST00000564697 1639 ntBASIC13.86□□□□□ -0.19
PTP4A1Q93096 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC13.86□□□□□ -0.19
PTP4A1Q93096 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
PTP4A1Q93096 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
PTP4A1Q93096 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
PTP4A1Q93096 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC13.86□□□□□ -0.19
PTP4A1Q93096 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PTP4A1Q93096 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PTP4A1Q93096 ARHGAP23P1-201ENST00000562773 1937 ntBASIC13.86□□□□□ -0.19
PTP4A1Q93096 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms