Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 AC234783.1-201ENST00000441761 496 ntBASIC16.36■□□□□ 0.21
DDX1Q92499 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
DDX1Q92499 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC16.36■□□□□ 0.21
DDX1Q92499 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC16.36■□□□□ 0.21
DDX1Q92499 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
DDX1Q92499 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC16.36■□□□□ 0.21
DDX1Q92499 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC16.36■□□□□ 0.21
DDX1Q92499 AC036164.1-201ENST00000570544 333 ntBASIC16.36■□□□□ 0.21
DDX1Q92499 AC132938.2-201ENST00000579188 680 ntBASIC16.36■□□□□ 0.21
DDX1Q92499 MIR8072-201ENST00000614241 80 ntBASIC16.36■□□□□ 0.21
DDX1Q92499 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC16.36■□□□□ 0.21
DDX1Q92499 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC16.36■□□□□ 0.21
DDX1Q92499 AL591163.1-201ENST00000641757 987 ntBASIC16.36■□□□□ 0.21
DDX1Q92499 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
DDX1Q92499 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
DDX1Q92499 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
DDX1Q92499 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
DDX1Q92499 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
DDX1Q92499 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
DDX1Q92499 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
DDX1Q92499 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC16.36■□□□□ 0.21
DDX1Q92499 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
DDX1Q92499 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
DDX1Q92499 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
DDX1Q92499 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC16.35■□□□□ 0.21
DDX1Q92499 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
DDX1Q92499 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
DDX1Q92499 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC16.35■□□□□ 0.21
DDX1Q92499 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
DDX1Q92499 AC007787.1-201ENST00000588095 1583 ntBASIC16.35■□□□□ 0.21
DDX1Q92499 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
DDX1Q92499 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
DDX1Q92499 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
DDX1Q92499 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC16.35■□□□□ 0.21
DDX1Q92499 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC16.35■□□□□ 0.21
DDX1Q92499 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
DDX1Q92499 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
DDX1Q92499 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
DDX1Q92499 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC16.35■□□□□ 0.21
DDX1Q92499 NEU3-203ENST00000529024 581 ntTSL 3 BASIC16.35■□□□□ 0.21
DDX1Q92499 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC16.35■□□□□ 0.21
DDX1Q92499 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC16.35■□□□□ 0.21
DDX1Q92499 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC16.35■□□□□ 0.21
DDX1Q92499 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC16.35■□□□□ 0.21
DDX1Q92499 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
DDX1Q92499 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
DDX1Q92499 AC133552.6-201ENST00000613406 534 ntBASIC16.35■□□□□ 0.21
DDX1Q92499 AL033527.4-201ENST00000641026 673 ntBASIC16.35■□□□□ 0.21
DDX1Q92499 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
DDX1Q92499 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
DDX1Q92499 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
DDX1Q92499 AC093525.8-201ENST00000624099 1342 ntBASIC16.35■□□□□ 0.21
DDX1Q92499 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
DDX1Q92499 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
DDX1Q92499 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC16.35■□□□□ 0.21
DDX1Q92499 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
DDX1Q92499 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC16.34■□□□□ 0.21
DDX1Q92499 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC16.34■□□□□ 0.21
DDX1Q92499 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
DDX1Q92499 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
DDX1Q92499 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
DDX1Q92499 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
DDX1Q92499 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
DDX1Q92499 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
DDX1Q92499 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
DDX1Q92499 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
DDX1Q92499 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
DDX1Q92499 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC16.34■□□□□ 0.21
DDX1Q92499 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC16.34■□□□□ 0.21
DDX1Q92499 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC16.34■□□□□ 0.21
DDX1Q92499 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
DDX1Q92499 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC16.34■□□□□ 0.21
DDX1Q92499 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
DDX1Q92499 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
DDX1Q92499 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
DDX1Q92499 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
DDX1Q92499 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
DDX1Q92499 AC092933.1-201ENST00000393644 945 ntBASIC16.34■□□□□ 0.21
DDX1Q92499 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
DDX1Q92499 AC004945.1-201ENST00000416738 983 ntBASIC16.34■□□□□ 0.21
DDX1Q92499 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC16.34■□□□□ 0.21
DDX1Q92499 CD81-207ENST00000481687 890 ntTSL 2 BASIC16.34■□□□□ 0.21
DDX1Q92499 AC093004.1-201ENST00000508850 424 ntBASIC16.34■□□□□ 0.21
DDX1Q92499 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC16.34■□□□□ 0.21
DDX1Q92499 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
DDX1Q92499 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
DDX1Q92499 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
DDX1Q92499 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC16.34■□□□□ 0.21
DDX1Q92499 RRP7BP-205ENST00000566851 833 ntBASIC16.34■□□□□ 0.21
DDX1Q92499 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC16.34■□□□□ 0.21
DDX1Q92499 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC16.34■□□□□ 0.21
DDX1Q92499 BRI3BPP1-201ENST00000594224 787 ntBASIC16.34■□□□□ 0.21
DDX1Q92499 AL049840.4-201ENST00000602422 811 ntBASIC16.34■□□□□ 0.21
DDX1Q92499 AC107373.2-201ENST00000607735 490 ntBASIC16.34■□□□□ 0.21
DDX1Q92499 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC16.34■□□□□ 0.21
DDX1Q92499 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC16.34■□□□□ 0.21
DDX1Q92499 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC16.34■□□□□ 0.21
DDX1Q92499 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
DDX1Q92499 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
DDX1Q92499 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms