Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC12.84□□□□□ -0.35
ZNF439Q8NDP4 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF439Q8NDP4 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
ZNF439Q8NDP4 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF439Q8NDP4 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC12.84□□□□□ -0.35
ZNF439Q8NDP4 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF439Q8NDP4 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF439Q8NDP4 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF439Q8NDP4 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF439Q8NDP4 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
ZNF439Q8NDP4 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
ZNF439Q8NDP4 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC12.83□□□□□ -0.35
ZNF439Q8NDP4 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
ZNF439Q8NDP4 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
ZNF439Q8NDP4 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
ZNF439Q8NDP4 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC12.83□□□□□ -0.35
ZNF439Q8NDP4 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
ZNF439Q8NDP4 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ZNF439Q8NDP4 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
ZNF439Q8NDP4 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ZNF439Q8NDP4 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ZNF439Q8NDP4 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
ZNF439Q8NDP4 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
ZNF439Q8NDP4 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ZNF439Q8NDP4 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC12.83□□□□□ -0.36
ZNF439Q8NDP4 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
ZNF439Q8NDP4 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC12.83□□□□□ -0.36
ZNF439Q8NDP4 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC12.83□□□□□ -0.36
ZNF439Q8NDP4 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC12.83□□□□□ -0.36
ZNF439Q8NDP4 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
ZNF439Q8NDP4 AC084364.1-201ENST00000551967 1556 ntBASIC12.83□□□□□ -0.36
ZNF439Q8NDP4 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC12.83□□□□□ -0.36
ZNF439Q8NDP4 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC12.83□□□□□ -0.36
ZNF439Q8NDP4 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
ZNF439Q8NDP4 CENPM-205ENST00000404067 905 ntTSL 3 BASIC12.83□□□□□ -0.36
ZNF439Q8NDP4 CENPM-206ENST00000407253 818 ntTSL 2 BASIC12.83□□□□□ -0.36
ZNF439Q8NDP4 AC107890.1-201ENST00000422478 521 ntBASIC12.83□□□□□ -0.36
ZNF439Q8NDP4 KRT18P64-201ENST00000434946 1219 ntBASIC12.83□□□□□ -0.36
ZNF439Q8NDP4 RPL13P2-201ENST00000440687 659 ntBASIC12.83□□□□□ -0.36
ZNF439Q8NDP4 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC12.83□□□□□ -0.36
ZNF439Q8NDP4 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC12.83□□□□□ -0.36
ZNF439Q8NDP4 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC12.83□□□□□ -0.36
ZNF439Q8NDP4 RN7SL618P-201ENST00000477850 296 ntBASIC12.83□□□□□ -0.36
ZNF439Q8NDP4 AC067863.1-201ENST00000494933 530 ntBASIC12.83□□□□□ -0.36
ZNF439Q8NDP4 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
ZNF439Q8NDP4 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC12.83□□□□□ -0.36
ZNF439Q8NDP4 LY6E-204ENST00000519546 971 ntTSL 2 BASIC12.83□□□□□ -0.36
ZNF439Q8NDP4 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC12.83□□□□□ -0.36
ZNF439Q8NDP4 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC12.83□□□□□ -0.36
ZNF439Q8NDP4 AC139530.3-201ENST00000620344 690 ntBASIC12.83□□□□□ -0.36
ZNF439Q8NDP4 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
ZNF439Q8NDP4 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
ZNF439Q8NDP4 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC12.83□□□□□ -0.36
ZNF439Q8NDP4 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC12.83□□□□□ -0.36
ZNF439Q8NDP4 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
ZNF439Q8NDP4 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC12.83□□□□□ -0.36
ZNF439Q8NDP4 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC12.83□□□□□ -0.36
ZNF439Q8NDP4 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
ZNF439Q8NDP4 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC12.83□□□□□ -0.36
ZNF439Q8NDP4 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ZNF439Q8NDP4 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
ZNF439Q8NDP4 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ZNF439Q8NDP4 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
ZNF439Q8NDP4 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ZNF439Q8NDP4 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ZNF439Q8NDP4 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC12.82□□□□□ -0.36
ZNF439Q8NDP4 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ZNF439Q8NDP4 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ZNF439Q8NDP4 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC12.82□□□□□ -0.36
ZNF439Q8NDP4 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
ZNF439Q8NDP4 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC12.82□□□□□ -0.36
ZNF439Q8NDP4 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ZNF439Q8NDP4 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC12.82□□□□□ -0.36
ZNF439Q8NDP4 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
ZNF439Q8NDP4 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ZNF439Q8NDP4 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ZNF439Q8NDP4 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
ZNF439Q8NDP4 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC12.82□□□□□ -0.36
ZNF439Q8NDP4 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ZNF439Q8NDP4 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ZNF439Q8NDP4 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ZNF439Q8NDP4 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
ZNF439Q8NDP4 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC12.82□□□□□ -0.36
ZNF439Q8NDP4 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ZNF439Q8NDP4 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ZNF439Q8NDP4 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ZNF439Q8NDP4 RPL5P21-201ENST00000404620 815 ntBASIC12.82□□□□□ -0.36
ZNF439Q8NDP4 RAD18-204ENST00000418463 563 ntTSL 4 BASIC12.82□□□□□ -0.36
ZNF439Q8NDP4 RAD18-205ENST00000421052 582 ntTSL 3 BASIC12.82□□□□□ -0.36
ZNF439Q8NDP4 AC092580.3-201ENST00000430932 139 ntBASIC12.82□□□□□ -0.36
ZNF439Q8NDP4 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ZNF439Q8NDP4 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC12.82□□□□□ -0.36
ZNF439Q8NDP4 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
ZNF439Q8NDP4 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC12.82□□□□□ -0.36
ZNF439Q8NDP4 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ZNF439Q8NDP4 AL158211.3-201ENST00000607385 239 ntBASIC12.82□□□□□ -0.36
ZNF439Q8NDP4 AC074044.1-201ENST00000609673 707 ntBASIC12.82□□□□□ -0.36
ZNF439Q8NDP4 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
ZNF439Q8NDP4 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC12.82□□□□□ -0.36
ZNF439Q8NDP4 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms