Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRRTM4Q86VH4 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC15.09■□□□□ 0.01
LRRTM4Q86VH4 RAB43P1-201ENST00000561790 589 ntBASIC15.09■□□□□ 0.01
LRRTM4Q86VH4 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC15.09■□□□□ 0.01
LRRTM4Q86VH4 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC15.09■□□□□ 0.01
LRRTM4Q86VH4 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LRRTM4Q86VH4 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC15.09■□□□□ 0.01
LRRTM4Q86VH4 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRRTM4Q86VH4 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.09■□□□□ 0.01
LRRTM4Q86VH4 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRRTM4Q86VH4 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC15.09■□□□□ 0.01
LRRTM4Q86VH4 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LRRTM4Q86VH4 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LRRTM4Q86VH4 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRRTM4Q86VH4 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRRTM4Q86VH4 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRRTM4Q86VH4 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
LRRTM4Q86VH4 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRRTM4Q86VH4 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRRTM4Q86VH4 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
LRRTM4Q86VH4 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
LRRTM4Q86VH4 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
LRRTM4Q86VH4 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC15.08■□□□□ 0.01
LRRTM4Q86VH4 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
LRRTM4Q86VH4 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
LRRTM4Q86VH4 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
LRRTM4Q86VH4 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
LRRTM4Q86VH4 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
LRRTM4Q86VH4 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC15.08■□□□□ 0
LRRTM4Q86VH4 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.08■□□□□ 0
LRRTM4Q86VH4 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LRRTM4Q86VH4 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC15.08■□□□□ 0
LRRTM4Q86VH4 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
LRRTM4Q86VH4 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LRRTM4Q86VH4 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LRRTM4Q86VH4 OR8S1-201ENST00000310194 1080 ntBASIC15.08■□□□□ 0
LRRTM4Q86VH4 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
LRRTM4Q86VH4 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
LRRTM4Q86VH4 GK-202ENST00000378941 458 ntTSL 3 BASIC15.08■□□□□ 0
LRRTM4Q86VH4 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
LRRTM4Q86VH4 PGF-202ENST00000405431 666 ntTSL 5 BASIC15.08■□□□□ 0
LRRTM4Q86VH4 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC15.08■□□□□ 0
LRRTM4Q86VH4 HIST1H2BPS3-201ENST00000419683 341 ntBASIC15.08■□□□□ 0
LRRTM4Q86VH4 AC112492.5-201ENST00000421897 457 ntBASIC15.08■□□□□ 0
LRRTM4Q86VH4 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
LRRTM4Q86VH4 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC15.08■□□□□ 0
LRRTM4Q86VH4 AC234783.1-201ENST00000441761 496 ntBASIC15.08■□□□□ 0
LRRTM4Q86VH4 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC15.08■□□□□ 0
LRRTM4Q86VH4 BCRP2-202ENST00000447763 634 ntBASIC15.08■□□□□ 0
LRRTM4Q86VH4 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC15.08■□□□□ 0
LRRTM4Q86VH4 BCRP6-201ENST00000510112 632 ntBASIC15.08■□□□□ 0
LRRTM4Q86VH4 BCRP7-201ENST00000511549 544 ntBASIC15.08■□□□□ 0
LRRTM4Q86VH4 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
LRRTM4Q86VH4 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC15.08■□□□□ 0
LRRTM4Q86VH4 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC15.08■□□□□ 0
LRRTM4Q86VH4 APRT-204ENST00000563655 709 ntTSL 5 BASIC15.08■□□□□ 0
LRRTM4Q86VH4 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC15.08■□□□□ 0
LRRTM4Q86VH4 PRSS30P-206ENST00000641773 873 ntBASIC15.08■□□□□ 0
LRRTM4Q86VH4 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LRRTM4Q86VH4 KRT8P35-201ENST00000483942 1338 ntBASIC15.08■□□□□ 0
LRRTM4Q86VH4 KRT8P44-201ENST00000441609 1350 ntBASIC15.08■□□□□ 0
LRRTM4Q86VH4 AC148477.4-201ENST00000613430 1793 ntBASIC15.08■□□□□ 0
LRRTM4Q86VH4 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
LRRTM4Q86VH4 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
LRRTM4Q86VH4 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LRRTM4Q86VH4 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC15.08■□□□□ 0
LRRTM4Q86VH4 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
LRRTM4Q86VH4 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.08■□□□□ 0
LRRTM4Q86VH4 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0
LRRTM4Q86VH4 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
LRRTM4Q86VH4 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LRRTM4Q86VH4 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LRRTM4Q86VH4 AC126365.1-201ENST00000578585 1514 ntBASIC15.07■□□□□ 0
LRRTM4Q86VH4 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LRRTM4Q86VH4 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
LRRTM4Q86VH4 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC15.07■□□□□ 0
LRRTM4Q86VH4 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC15.07■□□□□ 0
LRRTM4Q86VH4 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC15.07■□□□□ 0
LRRTM4Q86VH4 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LRRTM4Q86VH4 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.07■□□□□ 0
LRRTM4Q86VH4 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC15.07■□□□□ 0
LRRTM4Q86VH4 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
LRRTM4Q86VH4 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC15.07■□□□□ 0
LRRTM4Q86VH4 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LRRTM4Q86VH4 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
LRRTM4Q86VH4 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
LRRTM4Q86VH4 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC15.07■□□□□ 0
LRRTM4Q86VH4 KLF2P2-201ENST00000416807 1039 ntBASIC15.07■□□□□ 0
LRRTM4Q86VH4 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC15.07■□□□□ 0
LRRTM4Q86VH4 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC15.07■□□□□ 0
LRRTM4Q86VH4 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC15.07■□□□□ 0
LRRTM4Q86VH4 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC15.07■□□□□ 0
LRRTM4Q86VH4 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC15.07■□□□□ 0
LRRTM4Q86VH4 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC15.07■□□□□ 0
LRRTM4Q86VH4 ORC6-206ENST00000568364 888 ntTSL 5 BASIC15.07■□□□□ 0
LRRTM4Q86VH4 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC15.07■□□□□ 0
LRRTM4Q86VH4 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC15.07■□□□□ 0
LRRTM4Q86VH4 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC15.07■□□□□ 0
LRRTM4Q86VH4 PFAS-212ENST00000625942 396 ntTSL 5 BASIC15.07■□□□□ 0
LRRTM4Q86VH4 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms