Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
CSMD3Q7Z407 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC10.46□□□□□ -0.74
CSMD3Q7Z407 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
CSMD3Q7Z407 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
CSMD3Q7Z407 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
CSMD3Q7Z407 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
CSMD3Q7Z407 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC10.46□□□□□ -0.74
CSMD3Q7Z407 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC10.46□□□□□ -0.74
CSMD3Q7Z407 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC10.46□□□□□ -0.74
CSMD3Q7Z407 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC10.46□□□□□ -0.74
CSMD3Q7Z407 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
CSMD3Q7Z407 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
CSMD3Q7Z407 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC10.46□□□□□ -0.74
CSMD3Q7Z407 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
CSMD3Q7Z407 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC10.46□□□□□ -0.74
CSMD3Q7Z407 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC10.46□□□□□ -0.74
CSMD3Q7Z407 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
CSMD3Q7Z407 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
CSMD3Q7Z407 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
CSMD3Q7Z407 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC10.45□□□□□ -0.74
CSMD3Q7Z407 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
CSMD3Q7Z407 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC10.45□□□□□ -0.74
CSMD3Q7Z407 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC10.45□□□□□ -0.74
CSMD3Q7Z407 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
CSMD3Q7Z407 AP000356.3-201ENST00000382243 753 ntBASIC10.45□□□□□ -0.74
CSMD3Q7Z407 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
CSMD3Q7Z407 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC10.45□□□□□ -0.74
CSMD3Q7Z407 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC10.45□□□□□ -0.74
CSMD3Q7Z407 AC010234.1-201ENST00000494599 870 ntBASIC10.45□□□□□ -0.74
CSMD3Q7Z407 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
CSMD3Q7Z407 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC10.45□□□□□ -0.74
CSMD3Q7Z407 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CSMD3Q7Z407 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CSMD3Q7Z407 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
CSMD3Q7Z407 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CSMD3Q7Z407 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC10.45□□□□□ -0.74
CSMD3Q7Z407 AC020916.1-201ENST00000587762 1774 ntBASIC10.45□□□□□ -0.74
CSMD3Q7Z407 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
CSMD3Q7Z407 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC10.45□□□□□ -0.74
CSMD3Q7Z407 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
CSMD3Q7Z407 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
CSMD3Q7Z407 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
CSMD3Q7Z407 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
CSMD3Q7Z407 AC244394.1-201ENST00000435000 1665 ntBASIC10.45□□□□□ -0.74
CSMD3Q7Z407 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC10.45□□□□□ -0.74
CSMD3Q7Z407 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
CSMD3Q7Z407 AC007292.2-201ENST00000593524 1812 ntBASIC10.45□□□□□ -0.74
CSMD3Q7Z407 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC10.45□□□□□ -0.74
CSMD3Q7Z407 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
CSMD3Q7Z407 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
CSMD3Q7Z407 RN7SL163P-201ENST00000583100 276 ntBASIC10.45□□□□□ -0.74
CSMD3Q7Z407 AL132780.4-201ENST00000624870 1135 ntBASIC10.45□□□□□ -0.74
CSMD3Q7Z407 ILF3-AS1-201ENST00000591501 1983 ntBASIC10.45□□□□□ -0.74
CSMD3Q7Z407 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
CSMD3Q7Z407 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC10.45□□□□□ -0.74
CSMD3Q7Z407 MTHFR-217ENST00000641820 1569 ntBASIC10.45□□□□□ -0.74
CSMD3Q7Z407 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CSMD3Q7Z407 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC10.45□□□□□ -0.74
CSMD3Q7Z407 RAD51C-203ENST00000421782 567 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
CSMD3Q7Z407 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CSMD3Q7Z407 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC10.45□□□□□ -0.74
CSMD3Q7Z407 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC10.45□□□□□ -0.74
CSMD3Q7Z407 AC005962.1-201ENST00000584100 773 ntBASIC10.45□□□□□ -0.74
CSMD3Q7Z407 AC084781.1-201ENST00000613737 656 ntBASIC10.45□□□□□ -0.74
CSMD3Q7Z407 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC10.45□□□□□ -0.74
CSMD3Q7Z407 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC10.45□□□□□ -0.74
CSMD3Q7Z407 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC10.45□□□□□ -0.74
CSMD3Q7Z407 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC10.45□□□□□ -0.74
CSMD3Q7Z407 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CSMD3Q7Z407 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
CSMD3Q7Z407 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CSMD3Q7Z407 AC011270.2-201ENST00000624293 2550 ntBASIC10.45□□□□□ -0.74
CSMD3Q7Z407 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
CSMD3Q7Z407 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC10.45□□□□□ -0.74
CSMD3Q7Z407 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CSMD3Q7Z407 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC10.44□□□□□ -0.74
CSMD3Q7Z407 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CSMD3Q7Z407 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CSMD3Q7Z407 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
CSMD3Q7Z407 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
CSMD3Q7Z407 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC10.44□□□□□ -0.74
CSMD3Q7Z407 HLA-K-203ENST00000430151 1046 ntBASIC10.44□□□□□ -0.74
CSMD3Q7Z407 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC10.44□□□□□ -0.74
CSMD3Q7Z407 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC10.44□□□□□ -0.74
CSMD3Q7Z407 PFN2-205ENST00000461868 613 ntTSL 2 BASIC10.44□□□□□ -0.74
CSMD3Q7Z407 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC10.44□□□□□ -0.74
CSMD3Q7Z407 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
CSMD3Q7Z407 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CSMD3Q7Z407 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
CSMD3Q7Z407 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC10.44□□□□□ -0.74
CSMD3Q7Z407 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
CSMD3Q7Z407 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC10.44□□□□□ -0.74
CSMD3Q7Z407 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
CSMD3Q7Z407 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC10.44□□□□□ -0.74
CSMD3Q7Z407 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CSMD3Q7Z407 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CSMD3Q7Z407 LINC02447-202ENST00000501888 2146 ntBASIC10.44□□□□□ -0.74
CSMD3Q7Z407 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC10.44□□□□□ -0.74
CSMD3Q7Z407 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CSMD3Q7Z407 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC10.44□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms