Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
UBE3BQ7Z3V4 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC19.07■□□□□ 0.64
UBE3BQ7Z3V4 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
UBE3BQ7Z3V4 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
UBE3BQ7Z3V4 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC19.07■□□□□ 0.64
UBE3BQ7Z3V4 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
UBE3BQ7Z3V4 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC19.07■□□□□ 0.64
UBE3BQ7Z3V4 POM121L8P-201ENST00000417732 1281 ntBASIC19.07■□□□□ 0.64
UBE3BQ7Z3V4 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC19.07■□□□□ 0.64
UBE3BQ7Z3V4 POM121L9P-203ENST00000441984 1285 ntBASIC19.07■□□□□ 0.64
UBE3BQ7Z3V4 AC108725.1-201ENST00000495472 409 ntBASIC19.07■□□□□ 0.64
UBE3BQ7Z3V4 FAM86HP-204ENST00000513466 959 ntBASIC19.07■□□□□ 0.64
UBE3BQ7Z3V4 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC19.07■□□□□ 0.64
UBE3BQ7Z3V4 MIR4525-201ENST00000580000 75 ntBASIC19.07■□□□□ 0.64
UBE3BQ7Z3V4 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC19.07■□□□□ 0.64
UBE3BQ7Z3V4 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
UBE3BQ7Z3V4 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
UBE3BQ7Z3V4 PES1-204ENST00000402284 2144 ntTSL 5 BASIC19.07■□□□□ 0.64
UBE3BQ7Z3V4 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
UBE3BQ7Z3V4 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
UBE3BQ7Z3V4 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
UBE3BQ7Z3V4 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
UBE3BQ7Z3V4 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
UBE3BQ7Z3V4 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC19.06■□□□□ 0.64
UBE3BQ7Z3V4 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
UBE3BQ7Z3V4 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
UBE3BQ7Z3V4 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
UBE3BQ7Z3V4 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
UBE3BQ7Z3V4 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
UBE3BQ7Z3V4 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC19.06■□□□□ 0.64
UBE3BQ7Z3V4 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
UBE3BQ7Z3V4 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
UBE3BQ7Z3V4 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
UBE3BQ7Z3V4 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
UBE3BQ7Z3V4 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
UBE3BQ7Z3V4 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
UBE3BQ7Z3V4 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC19.06■□□□□ 0.64
UBE3BQ7Z3V4 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
UBE3BQ7Z3V4 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
UBE3BQ7Z3V4 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
UBE3BQ7Z3V4 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
UBE3BQ7Z3V4 AC245100.3-201ENST00000441281 285 ntBASIC19.06■□□□□ 0.64
UBE3BQ7Z3V4 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC19.06■□□□□ 0.64
UBE3BQ7Z3V4 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
UBE3BQ7Z3V4 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC19.06■□□□□ 0.64
UBE3BQ7Z3V4 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
UBE3BQ7Z3V4 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC19.06■□□□□ 0.64
UBE3BQ7Z3V4 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC19.06■□□□□ 0.64
UBE3BQ7Z3V4 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC19.06■□□□□ 0.64
UBE3BQ7Z3V4 MIR6869-201ENST00000619434 62 ntBASIC19.06■□□□□ 0.64
UBE3BQ7Z3V4 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
UBE3BQ7Z3V4 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC19.06■□□□□ 0.64
UBE3BQ7Z3V4 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
UBE3BQ7Z3V4 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC19.06■□□□□ 0.64
UBE3BQ7Z3V4 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
UBE3BQ7Z3V4 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC19.06■□□□□ 0.64
UBE3BQ7Z3V4 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
UBE3BQ7Z3V4 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
UBE3BQ7Z3V4 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
UBE3BQ7Z3V4 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
UBE3BQ7Z3V4 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
UBE3BQ7Z3V4 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC19.06■□□□□ 0.64
UBE3BQ7Z3V4 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC19.06■□□□□ 0.64
UBE3BQ7Z3V4 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
UBE3BQ7Z3V4 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
UBE3BQ7Z3V4 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
UBE3BQ7Z3V4 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC19.05■□□□□ 0.64
UBE3BQ7Z3V4 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
UBE3BQ7Z3V4 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
UBE3BQ7Z3V4 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
UBE3BQ7Z3V4 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
UBE3BQ7Z3V4 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC19.05■□□□□ 0.64
UBE3BQ7Z3V4 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
UBE3BQ7Z3V4 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
UBE3BQ7Z3V4 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
UBE3BQ7Z3V4 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC19.05■□□□□ 0.64
UBE3BQ7Z3V4 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
UBE3BQ7Z3V4 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
UBE3BQ7Z3V4 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
UBE3BQ7Z3V4 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC19.05■□□□□ 0.64
UBE3BQ7Z3V4 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
UBE3BQ7Z3V4 DUX4L47-201ENST00000566374 394 ntBASIC19.05■□□□□ 0.64
UBE3BQ7Z3V4 DERL2-202ENST00000570848 657 ntTSL 5 BASIC19.05■□□□□ 0.64
UBE3BQ7Z3V4 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC19.05■□□□□ 0.64
UBE3BQ7Z3V4 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC19.05■□□□□ 0.64
UBE3BQ7Z3V4 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
UBE3BQ7Z3V4 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
UBE3BQ7Z3V4 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
UBE3BQ7Z3V4 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
UBE3BQ7Z3V4 FUK-207ENST00000571514 3054 ntTSL 2 BASIC19.05■□□□□ 0.64
UBE3BQ7Z3V4 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
UBE3BQ7Z3V4 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
UBE3BQ7Z3V4 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC19.05■□□□□ 0.64
UBE3BQ7Z3V4 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
UBE3BQ7Z3V4 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
UBE3BQ7Z3V4 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
UBE3BQ7Z3V4 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
UBE3BQ7Z3V4 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
UBE3BQ7Z3V4 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
UBE3BQ7Z3V4 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms